Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 AC012618.2-201ENST00000428058 849 ntBASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 MIR6786-201ENST00000616843 113 ntBASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 AC130371.2-201ENST00000619443 611 ntBASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS9D1Q9Y2B5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 AL031598.1-201ENST00000561511 1773 ntBASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 AL158047.1-201ENST00000445918 881 ntBASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 CD177P1-201ENST00000606252 935 ntBASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 KRT8P3-201ENST00000519669 1449 ntBASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS9D1Q9Y2B5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 AL020996.1-203ENST00000536896 2307 ntBASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 AC098590.1-201ENST00000468126 897 ntBASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 B3GAT3P1-201ENST00000471720 806 ntBASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 CKBP1-201ENST00000565489 1086 ntBASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS9D1Q9Y2B5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
VPS9D1Q9Y2B5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms