Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 MIR1238-201ENST00000408483 83 ntBASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 AL020996.1-203ENST00000536896 2307 ntBASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 AC087289.5-201ENST00000586076 3175 ntBASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUEDC1Q9NWM3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 FITM1-202ENST00000559294 800 ntBASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 AP005242.2-201ENST00000580065 1175 ntBASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 KRT8P9-201ENST00000558927 1449 ntBASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUEDC1Q9NWM3 AP000974.1-201ENST00000623909 2387 ntBASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 AC005363.2-201ENST00000618631 242 ntBASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 AC120498.9-201ENST00000339021 3867 ntBASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.28■□□□□ 0.52
CUEDC1Q9NWM3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms