Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
C11orf49Q9H6J7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
C11orf49Q9H6J7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
C11orf49Q9H6J7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf49Q9H6J7 ZNF815P-204ENST00000434898 1737 ntBASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 ZNF259P1-201ENST00000407656 1365 ntBASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 IGHGP-201ENST00000390555 1178 ntBASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 POM121L3P-201ENST00000419331 1163 ntBASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 AC073648.2-201ENST00000510116 352 ntBASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
C11orf49Q9H6J7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 AC091607.1-201ENST00000490318 1060 ntBASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 LINC02084-201ENST00000606069 1096 ntBASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
C11orf49Q9H6J7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 AL591684.3-201ENST00000605187 298 ntBASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 AL139424.1-201ENST00000607572 797 ntBASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 AL691432.2-201ENST00000607222 2038 ntBASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C11orf49Q9H6J7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
C11orf49Q9H6J7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
C11orf49Q9H6J7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.72■□□□□ 0.91
C11orf49Q9H6J7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
C11orf49Q9H6J7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
C11orf49Q9H6J7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
C11orf49Q9H6J7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C11orf49Q9H6J7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.72■□□□□ 0.91
C11orf49Q9H6J7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms