Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2OQ9C0C9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
UBE2OQ9C0C9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
UBE2OQ9C0C9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2OQ9C0C9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
UBE2OQ9C0C9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2OQ9C0C9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE2OQ9C0C9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.84■□□□□ 0.93
UBE2OQ9C0C9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 AP001005.1-201ENST00000571755 1248 ntBASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 AC024243.1-201ENST00000609234 778 ntBASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
UBE2OQ9C0C9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
UBE2OQ9C0C9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 SLC25A1P1-201ENST00000528351 927 ntBASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2OQ9C0C9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 LINC01521-201ENST00000504184 1943 ntBASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
UBE2OQ9C0C9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 KRT8P11-201ENST00000409686 1436 ntBASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 POLD2P1-201ENST00000511220 997 ntBASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
UBE2OQ9C0C9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms