Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP4Q9BWG4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP4Q9BWG4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SSBP4Q9BWG4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
SSBP4Q9BWG4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP4Q9BWG4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP4Q9BWG4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 NIFKP4-201ENST00000567275 1192 ntBASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP4Q9BWG4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP4Q9BWG4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms