Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMOQ99835 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMOQ99835 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
SMOQ99835 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 MCCD1P1-208ENST00000445732 328 ntBASIC19.85■□□□□ 0.77
SMOQ99835 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SMOQ99835 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.85■□□□□ 0.77
SMOQ99835 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.85■□□□□ 0.77
SMOQ99835 WWOX-216ENST00000569818 525 ntBASIC19.85■□□□□ 0.77
SMOQ99835 AC139887.4-201ENST00000607877 719 ntBASIC19.85■□□□□ 0.77
SMOQ99835 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SMOQ99835 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.85■□□□□ 0.77
SMOQ99835 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SMOQ99835 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMOQ99835 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.84■□□□□ 0.77
SMOQ99835 AC036111.1-201ENST00000533973 1582 ntBASIC19.84■□□□□ 0.77
SMOQ99835 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.84■□□□□ 0.77
SMOQ99835 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.84■□□□□ 0.77
SMOQ99835 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 AC009947.2-201ENST00000444014 672 ntBASIC19.84■□□□□ 0.77
SMOQ99835 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.84■□□□□ 0.77
SMOQ99835 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.84■□□□□ 0.77
SMOQ99835 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.84■□□□□ 0.77
SMOQ99835 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMOQ99835 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.83■□□□□ 0.77
SMOQ99835 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
SMOQ99835 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.83■□□□□ 0.77
SMOQ99835 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
SMOQ99835 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.83■□□□□ 0.77
SMOQ99835 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.83■□□□□ 0.77
SMOQ99835 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SMOQ99835 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 MIR1224-201ENST00000408193 85 ntBASIC19.83■□□□□ 0.77
SMOQ99835 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMOQ99835 DUX4L26-201ENST00000489078 1255 ntBASIC19.83■□□□□ 0.77
SMOQ99835 COX11P1-201ENST00000489116 835 ntBASIC19.83■□□□□ 0.77
SMOQ99835 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.83■□□□□ 0.77
SMOQ99835 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.83■□□□□ 0.77
SMOQ99835 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.83■□□□□ 0.76
SMOQ99835 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
SMOQ99835 AC008556.1-201ENST00000610908 2040 ntBASIC19.83■□□□□ 0.76
SMOQ99835 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.83■□□□□ 0.76
SMOQ99835 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.83■□□□□ 0.76
SMOQ99835 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.82■□□□□ 0.76
SMOQ99835 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SMOQ99835 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 AL109659.2-201ENST00000606809 1674 ntBASIC19.82■□□□□ 0.76
SMOQ99835 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.82■□□□□ 0.76
SMOQ99835 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMOQ99835 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SMOQ99835 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SMOQ99835 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.82■□□□□ 0.76
SMOQ99835 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.82■□□□□ 0.76
SMOQ99835 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.82■□□□□ 0.76
SMOQ99835 MIR3180-5-201ENST00000583743 153 ntBASIC19.82■□□□□ 0.76
SMOQ99835 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms