Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.11■□□□□ 0.49
BARD1Q99728 AC004264.1-201ENST00000608354 794 ntBASIC18.11■□□□□ 0.49
BARD1Q99728 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.11■□□□□ 0.49
BARD1Q99728 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 KRT8P9-201ENST00000558927 1449 ntBASIC18.11■□□□□ 0.49
BARD1Q99728 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.11■□□□□ 0.49
BARD1Q99728 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BARD1Q99728 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
BARD1Q99728 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.1■□□□□ 0.49
BARD1Q99728 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
BARD1Q99728 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
BARD1Q99728 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.1■□□□□ 0.49
BARD1Q99728 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 KRT8P20-201ENST00000423953 1409 ntBASIC18.1■□□□□ 0.49
BARD1Q99728 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BARD1Q99728 ARMC10P1-201ENST00000313754 855 ntBASIC18.1■□□□□ 0.49
BARD1Q99728 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.1■□□□□ 0.49
BARD1Q99728 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.1■□□□□ 0.49
BARD1Q99728 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.1■□□□□ 0.49
BARD1Q99728 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
BARD1Q99728 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
BARD1Q99728 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.1■□□□□ 0.49
BARD1Q99728 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BARD1Q99728 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BARD1Q99728 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BARD1Q99728 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BARD1Q99728 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BARD1Q99728 AC005332.8-201ENST00000622750 2735 ntBASIC18.09■□□□□ 0.49
BARD1Q99728 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.09■□□□□ 0.49
BARD1Q99728 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.09■□□□□ 0.49
BARD1Q99728 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BARD1Q99728 AC073508.3-201ENST00000619697 1419 ntBASIC18.09■□□□□ 0.49
BARD1Q99728 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BARD1Q99728 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BARD1Q99728 AC005521.1-201ENST00000393351 872 ntBASIC18.09■□□□□ 0.49
BARD1Q99728 AC113347.1-201ENST00000413321 391 ntBASIC18.09■□□□□ 0.49
BARD1Q99728 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BARD1Q99728 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.09■□□□□ 0.49
BARD1Q99728 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.09■□□□□ 0.49
BARD1Q99728 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BARD1Q99728 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BARD1Q99728 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BARD1Q99728 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.09■□□□□ 0.49
BARD1Q99728 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.09■□□□□ 0.49
BARD1Q99728 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.08■□□□□ 0.49
BARD1Q99728 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BARD1Q99728 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BARD1Q99728 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BARD1Q99728 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
BARD1Q99728 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.49
BARD1Q99728 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.08■□□□□ 0.49
BARD1Q99728 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.08■□□□□ 0.49
BARD1Q99728 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.08■□□□□ 0.48
BARD1Q99728 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.08■□□□□ 0.48
BARD1Q99728 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.08■□□□□ 0.48
BARD1Q99728 FITM1-202ENST00000559294 800 ntBASIC18.08■□□□□ 0.48
BARD1Q99728 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.08■□□□□ 0.48
BARD1Q99728 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.08■□□□□ 0.48
BARD1Q99728 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.08■□□□□ 0.48
BARD1Q99728 AP000525.1-201ENST00000608286 694 ntBASIC18.08■□□□□ 0.48
BARD1Q99728 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.08■□□□□ 0.48
BARD1Q99728 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
BARD1Q99728 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 AC006333.2-201ENST00000607957 2099 ntBASIC18.08■□□□□ 0.48
BARD1Q99728 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
BARD1Q99728 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BARD1Q99728 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
BARD1Q99728 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
BARD1Q99728 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
BARD1Q99728 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms