Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.22■□□□□ 0.83
RAD9AQ99638 IGHV3-41-201ENST00000613121 348 ntBASIC20.22■□□□□ 0.83
RAD9AQ99638 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAD9AQ99638 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAD9AQ99638 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
RAD9AQ99638 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAD9AQ99638 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAD9AQ99638 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.21■□□□□ 0.83
RAD9AQ99638 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAD9AQ99638 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.21■□□□□ 0.83
RAD9AQ99638 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAD9AQ99638 AC073314.1-201ENST00000568729 2216 ntBASIC20.21■□□□□ 0.83
RAD9AQ99638 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.21■□□□□ 0.83
RAD9AQ99638 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.21■□□□□ 0.83
RAD9AQ99638 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAD9AQ99638 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.21■□□□□ 0.83
RAD9AQ99638 AC074051.2-201ENST00000565115 352 ntBASIC20.21■□□□□ 0.83
RAD9AQ99638 AC005332.3-201ENST00000589904 676 ntBASIC20.21■□□□□ 0.83
RAD9AQ99638 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.21■□□□□ 0.83
RAD9AQ99638 AC138894.3-201ENST00000603787 634 ntBASIC20.21■□□□□ 0.83
RAD9AQ99638 AL353801.3-201ENST00000609898 542 ntBASIC20.21■□□□□ 0.83
RAD9AQ99638 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RAD9AQ99638 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAD9AQ99638 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAD9AQ99638 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RAD9AQ99638 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.21■□□□□ 0.83
RAD9AQ99638 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.21■□□□□ 0.83
RAD9AQ99638 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAD9AQ99638 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 KRT8P7-201ENST00000533003 1432 ntBASIC20.2■□□□□ 0.82
RAD9AQ99638 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 MRPL3P1-201ENST00000400109 1033 ntBASIC20.2■□□□□ 0.82
RAD9AQ99638 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.2■□□□□ 0.82
RAD9AQ99638 KRT16P4-201ENST00000453883 522 ntBASIC20.2■□□□□ 0.82
RAD9AQ99638 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.2■□□□□ 0.82
RAD9AQ99638 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.2■□□□□ 0.82
RAD9AQ99638 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.2■□□□□ 0.82
RAD9AQ99638 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
RAD9AQ99638 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 AL162377.1-201ENST00000618844 1793 ntBASIC20.2■□□□□ 0.82
RAD9AQ99638 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.2■□□□□ 0.82
RAD9AQ99638 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RAD9AQ99638 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.2■□□□□ 0.82
RAD9AQ99638 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RAD9AQ99638 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAD9AQ99638 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.2■□□□□ 0.82
RAD9AQ99638 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.19■□□□□ 0.82
RAD9AQ99638 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RAD9AQ99638 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.19■□□□□ 0.82
RAD9AQ99638 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
RAD9AQ99638 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.19■□□□□ 0.82
RAD9AQ99638 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.19■□□□□ 0.82
RAD9AQ99638 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.19■□□□□ 0.82
RAD9AQ99638 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RAD9AQ99638 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.19■□□□□ 0.82
RAD9AQ99638 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.19■□□□□ 0.82
RAD9AQ99638 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAD9AQ99638 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.18■□□□□ 0.82
RAD9AQ99638 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAD9AQ99638 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAD9AQ99638 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RAD9AQ99638 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAD9AQ99638 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.18■□□□□ 0.82
RAD9AQ99638 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.18■□□□□ 0.82
RAD9AQ99638 AP003733.1-201ENST00000491725 852 ntBASIC20.18■□□□□ 0.82
RAD9AQ99638 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.18■□□□□ 0.82
RAD9AQ99638 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.18■□□□□ 0.82
RAD9AQ99638 AC104390.1-201ENST00000555663 520 ntBASIC20.18■□□□□ 0.82
RAD9AQ99638 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.18■□□□□ 0.82
RAD9AQ99638 Z69720.1-201ENST00000601483 472 ntBASIC20.18■□□□□ 0.82
RAD9AQ99638 BX640515.1-201ENST00000617215 977 ntBASIC20.18■□□□□ 0.82
RAD9AQ99638 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 HLA-A-201ENST00000376802 1334 ntBASIC20.18■□□□□ 0.82
RAD9AQ99638 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 AC233702.3-201ENST00000578656 1387 ntBASIC20.18■□□□□ 0.82
RAD9AQ99638 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms