Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 AC140113.3-201ENST00000605663 199 ntBASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP1Q96SZ6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.64■□□□□ 0.74
CDK5RAP1Q96SZ6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK5RAP1Q96SZ6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK5RAP1Q96SZ6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 AC117947.1-201ENST00000427448 529 ntBASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 MIR3180-5-201ENST00000583743 153 ntBASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 CR769767.2-201ENST00000622735 460 ntBASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
CDK5RAP1Q96SZ6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 AL512353.2-201ENST00000448759 1962 ntBASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 YBX1P2-201ENST00000489612 999 ntBASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 AC139887.4-201ENST00000607877 719 ntBASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP1Q96SZ6 AL109659.2-201ENST00000606809 1674 ntBASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 AC009947.2-201ENST00000444014 672 ntBASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP1Q96SZ6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms