Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 AC024243.1-201ENST00000609234 778 ntBASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CSMD1Q96PZ7 AC099343.3-201ENST00000605834 2503 ntBASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 AC079834.2-201ENST00000609776 1949 ntBASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 AL691432.2-201ENST00000607222 2038 ntBASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 HTR5BP-201ENST00000430851 1154 ntBASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSMD1Q96PZ7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.08■□□□□ 0.17
CSMD1Q96PZ7 AC004967.1-201ENST00000453589 447 ntBASIC16.08■□□□□ 0.17
CSMD1Q96PZ7 SEC1P-202ENST00000473944 940 ntBASIC16.08■□□□□ 0.17
CSMD1Q96PZ7 SART3-203ENST00000546611 1184 ntBASIC16.08■□□□□ 0.17
CSMD1Q96PZ7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.08■□□□□ 0.17
CSMD1Q96PZ7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CSMD1Q96PZ7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSMD1Q96PZ7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CSMD1Q96PZ7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CSMD1Q96PZ7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms