Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NEK1Q96PY6 Z98044.1-201ENST00000632503 1764 ntBASIC22.41■■□□□ 1.18
NEK1Q96PY6 AIRN-201ENST00000601203 4374 ntBASIC22.41■■□□□ 1.18
NEK1Q96PY6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NEK1Q96PY6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NEK1Q96PY6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NEK1Q96PY6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
NEK1Q96PY6 MIR718-201ENST00000390190 70 ntBASIC22.41■■□□□ 1.18
NEK1Q96PY6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NEK1Q96PY6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.41■■□□□ 1.18
NEK1Q96PY6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NEK1Q96PY6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.41■■□□□ 1.18
NEK1Q96PY6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
NEK1Q96PY6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.41■■□□□ 1.18
NEK1Q96PY6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NEK1Q96PY6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NEK1Q96PY6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NEK1Q96PY6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.4■■□□□ 1.18
NEK1Q96PY6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NEK1Q96PY6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.4■■□□□ 1.18
NEK1Q96PY6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NEK1Q96PY6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NEK1Q96PY6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NEK1Q96PY6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NEK1Q96PY6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NEK1Q96PY6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
NEK1Q96PY6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NEK1Q96PY6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
NEK1Q96PY6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.4■■□□□ 1.18
NEK1Q96PY6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.4■■□□□ 1.18
NEK1Q96PY6 DGCR10-201ENST00000609839 495 ntBASIC22.4■■□□□ 1.18
NEK1Q96PY6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NEK1Q96PY6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.4■■□□□ 1.18
NEK1Q96PY6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
NEK1Q96PY6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.39■■□□□ 1.18
NEK1Q96PY6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
NEK1Q96PY6 AC096733.2-201ENST00000609937 1394 ntBASIC22.39■■□□□ 1.18
NEK1Q96PY6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.39■■□□□ 1.18
NEK1Q96PY6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
NEK1Q96PY6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.39■■□□□ 1.18
NEK1Q96PY6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NEK1Q96PY6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NEK1Q96PY6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NEK1Q96PY6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NEK1Q96PY6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NEK1Q96PY6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NEK1Q96PY6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NEK1Q96PY6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.39■■□□□ 1.17
NEK1Q96PY6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 TSPY7P-201ENST00000431358 1114 ntBASIC22.38■■□□□ 1.17
NEK1Q96PY6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 AP003071.4-201ENST00000562276 1284 ntBASIC22.38■■□□□ 1.17
NEK1Q96PY6 SLC25A1P4-201ENST00000567977 778 ntBASIC22.38■■□□□ 1.17
NEK1Q96PY6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.38■■□□□ 1.17
NEK1Q96PY6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NEK1Q96PY6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 AC097488.1-201ENST00000507834 756 ntBASIC22.37■■□□□ 1.17
NEK1Q96PY6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms