Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SNX27Q96L92 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX27Q96L92 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SNX27Q96L92 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.44■□□□□ 0.86
SNX27Q96L92 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX27Q96L92 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX27Q96L92 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.43■□□□□ 0.86
SNX27Q96L92 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SNX27Q96L92 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX27Q96L92 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SNX27Q96L92 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX27Q96L92 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.43■□□□□ 0.86
SNX27Q96L92 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.43■□□□□ 0.86
SNX27Q96L92 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX27Q96L92 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX27Q96L92 AC063952.2-201ENST00000498792 1227 ntBASIC20.43■□□□□ 0.86
SNX27Q96L92 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.43■□□□□ 0.86
SNX27Q96L92 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.43■□□□□ 0.86
SNX27Q96L92 AL691432.3-201ENST00000621860 400 ntBASIC20.43■□□□□ 0.86
SNX27Q96L92 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX27Q96L92 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX27Q96L92 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SNX27Q96L92 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.42■□□□□ 0.86
SNX27Q96L92 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX27Q96L92 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.42■□□□□ 0.86
SNX27Q96L92 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 RNF152P1-201ENST00000397754 604 ntBASIC20.42■□□□□ 0.86
SNX27Q96L92 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.42■□□□□ 0.86
SNX27Q96L92 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.42■□□□□ 0.86
SNX27Q96L92 AC022616.7-201ENST00000525383 220 ntBASIC20.42■□□□□ 0.86
SNX27Q96L92 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.42■□□□□ 0.86
SNX27Q96L92 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.42■□□□□ 0.86
SNX27Q96L92 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 AC011558.1-201ENST00000623459 338 ntBASIC20.42■□□□□ 0.86
SNX27Q96L92 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SNX27Q96L92 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
SNX27Q96L92 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.42■□□□□ 0.86
SNX27Q96L92 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX27Q96L92 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX27Q96L92 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SNX27Q96L92 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SNX27Q96L92 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX27Q96L92 PVRIG2P-201ENST00000435460 978 ntBASIC20.41■□□□□ 0.86
SNX27Q96L92 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.41■□□□□ 0.86
SNX27Q96L92 MCCD1P1-208ENST00000445732 328 ntBASIC20.41■□□□□ 0.86
SNX27Q96L92 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.41■□□□□ 0.86
SNX27Q96L92 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.41■□□□□ 0.86
SNX27Q96L92 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.41■□□□□ 0.86
SNX27Q96L92 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 AC036111.1-201ENST00000533973 1582 ntBASIC20.41■□□□□ 0.86
SNX27Q96L92 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX27Q96L92 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.41■□□□□ 0.86
SNX27Q96L92 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SNX27Q96L92 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX27Q96L92 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX27Q96L92 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX27Q96L92 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX27Q96L92 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
SNX27Q96L92 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX27Q96L92 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX27Q96L92 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX27Q96L92 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SNX27Q96L92 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
SNX27Q96L92 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SNX27Q96L92 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.4■□□□□ 0.86
SNX27Q96L92 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.4■□□□□ 0.86
SNX27Q96L92 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.4■□□□□ 0.86
SNX27Q96L92 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX27Q96L92 AL512353.2-201ENST00000448759 1962 ntBASIC20.4■□□□□ 0.86
SNX27Q96L92 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX27Q96L92 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX27Q96L92 AL441883.1-201ENST00000566170 1045 ntBASIC20.4■□□□□ 0.86
SNX27Q96L92 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX27Q96L92 NEK4P2-201ENST00000580004 1012 ntBASIC20.4■□□□□ 0.86
SNX27Q96L92 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX27Q96L92 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms