Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AL359075.1-203ENST00000462729 1002 ntBASIC24.7■■□□□ 1.54
RTF1Q92541 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC24.7■■□□□ 1.54
RTF1Q92541 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.7■■□□□ 1.54
RTF1Q92541 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.7■■□□□ 1.54
RTF1Q92541 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.7■■□□□ 1.54
RTF1Q92541 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RTF1Q92541 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.7■■□□□ 1.54
RTF1Q92541 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
RTF1Q92541 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC24.7■■□□□ 1.54
RTF1Q92541 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RTF1Q92541 MYC-208ENST00000641036 567 ntBASIC24.7■■□□□ 1.54
RTF1Q92541 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTF1Q92541 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTF1Q92541 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
RTF1Q92541 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RTF1Q92541 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
RTF1Q92541 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
RTF1Q92541 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTF1Q92541 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
RTF1Q92541 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
RTF1Q92541 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTF1Q92541 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTF1Q92541 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC24.69■■□□□ 1.54
RTF1Q92541 AC036111.1-201ENST00000533973 1582 ntBASIC24.69■■□□□ 1.54
RTF1Q92541 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTF1Q92541 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC24.69■■□□□ 1.54
RTF1Q92541 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.69■■□□□ 1.54
RTF1Q92541 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTF1Q92541 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.69■■□□□ 1.54
RTF1Q92541 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.69■■□□□ 1.54
RTF1Q92541 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTF1Q92541 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
RTF1Q92541 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.69■■□□□ 1.54
RTF1Q92541 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.69■■□□□ 1.54
RTF1Q92541 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.69■■□□□ 1.54
RTF1Q92541 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.69■■□□□ 1.54
RTF1Q92541 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTF1Q92541 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTF1Q92541 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.69■■□□□ 1.54
RTF1Q92541 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.69■■□□□ 1.54
RTF1Q92541 KATNBL1P6-202ENST00000562413 1466 ntBASIC24.69■■□□□ 1.54
RTF1Q92541 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC24.68■■□□□ 1.54
RTF1Q92541 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.68■■□□□ 1.54
RTF1Q92541 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTF1Q92541 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTF1Q92541 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.68■■□□□ 1.54
RTF1Q92541 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTF1Q92541 AL031133.1-201ENST00000406807 723 ntBASIC24.68■■□□□ 1.54
RTF1Q92541 GCSHP2-201ENST00000560971 527 ntBASIC24.68■■□□□ 1.54
RTF1Q92541 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.68■■□□□ 1.54
RTF1Q92541 MIR3180-5-201ENST00000583743 153 ntBASIC24.68■■□□□ 1.54
RTF1Q92541 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTF1Q92541 AC093484.2-201ENST00000580996 2166 ntBASIC24.68■■□□□ 1.54
RTF1Q92541 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTF1Q92541 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.68■■□□□ 1.54
RTF1Q92541 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
RTF1Q92541 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
RTF1Q92541 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RTF1Q92541 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RTF1Q92541 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.67■■□□□ 1.54
RTF1Q92541 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.67■■□□□ 1.54
RTF1Q92541 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
RTF1Q92541 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.67■■□□□ 1.54
RTF1Q92541 AL032819.2-201ENST00000624543 2162 ntBASIC24.67■■□□□ 1.54
RTF1Q92541 AC007952.6-201ENST00000573168 2673 ntBASIC24.67■■□□□ 1.54
RTF1Q92541 AC003957.1-201ENST00000625108 2673 ntBASIC24.67■■□□□ 1.54
RTF1Q92541 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTF1Q92541 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC24.66■■□□□ 1.54
RTF1Q92541 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTF1Q92541 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTF1Q92541 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
RTF1Q92541 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.66■■□□□ 1.54
RTF1Q92541 FP475955.4-201ENST00000623131 1990 ntBASIC24.66■■□□□ 1.54
RTF1Q92541 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTF1Q92541 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.66■■□□□ 1.54
RTF1Q92541 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.66■■□□□ 1.54
RTF1Q92541 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC24.66■■□□□ 1.54
RTF1Q92541 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTF1Q92541 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTF1Q92541 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
RTF1Q92541 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTF1Q92541 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.66■■□□□ 1.54
RTF1Q92541 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTF1Q92541 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTF1Q92541 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.66■■□□□ 1.54
RTF1Q92541 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTF1Q92541 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
RTF1Q92541 AL512353.2-201ENST00000448759 1962 ntBASIC24.65■■□□□ 1.54
RTF1Q92541 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTF1Q92541 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC24.65■■□□□ 1.54
RTF1Q92541 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms