Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 AC110285.6-201ENST00000617652 491 ntBASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 AC012317.2-201ENST00000623305 2251 ntBASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.19■□□□□ 0.18
SMIM4Q8WVI0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 AC135776.1-201ENST00000319817 2481 ntBASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.18■□□□□ 0.18
SMIM4Q8WVI0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 KRT8P8-201ENST00000434750 1448 ntBASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.17■□□□□ 0.18
SMIM4Q8WVI0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 KRT18P14-201ENST00000534205 1250 ntBASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.16■□□□□ 0.18
SMIM4Q8WVI0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms