Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 AL121912.1-201ENST00000603683 238 ntBASIC23.04■■□□□ 1.28
SNED1Q8TER0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.04■■□□□ 1.28
SNED1Q8TER0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNED1Q8TER0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 HOXB1-202ENST00000577092 1414 ntBASIC23.03■■□□□ 1.28
SNED1Q8TER0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNED1Q8TER0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SNED1Q8TER0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNED1Q8TER0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SNED1Q8TER0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.02■■□□□ 1.28
SNED1Q8TER0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SNED1Q8TER0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.02■■□□□ 1.28
SNED1Q8TER0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.02■■□□□ 1.28
SNED1Q8TER0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.02■■□□□ 1.28
SNED1Q8TER0 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.02■■□□□ 1.28
SNED1Q8TER0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.02■■□□□ 1.28
SNED1Q8TER0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNED1Q8TER0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.02■■□□□ 1.28
SNED1Q8TER0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNED1Q8TER0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SNED1Q8TER0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.02■■□□□ 1.27
SNED1Q8TER0 AC233702.3-201ENST00000578656 1387 ntBASIC23.01■■□□□ 1.27
SNED1Q8TER0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 AC010240.3-201ENST00000607688 395 ntBASIC23.01■■□□□ 1.27
SNED1Q8TER0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.01■■□□□ 1.27
SNED1Q8TER0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNED1Q8TER0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23■■□□□ 1.27
SNED1Q8TER0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 IGHV3-47-201ENST00000425060 335 ntBASIC23■■□□□ 1.27
SNED1Q8TER0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
SNED1Q8TER0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
SNED1Q8TER0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23■■□□□ 1.27
SNED1Q8TER0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
SNED1Q8TER0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23■■□□□ 1.27
SNED1Q8TER0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
SNED1Q8TER0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23■■□□□ 1.27
SNED1Q8TER0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNED1Q8TER0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.99■■□□□ 1.27
SNED1Q8TER0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.99■■□□□ 1.27
SNED1Q8TER0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 AL662844.1-201ENST00000546340 181 ntBASIC22.99■■□□□ 1.27
SNED1Q8TER0 AC104390.1-201ENST00000555663 520 ntBASIC22.99■■□□□ 1.27
SNED1Q8TER0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.99■■□□□ 1.27
SNED1Q8TER0 AC138894.3-201ENST00000603787 634 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms