Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SIMC1Q8NDZ2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 AL031985.4-201ENST00000642138 673 ntBASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SIMC1Q8NDZ2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIMC1Q8NDZ2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIMC1Q8NDZ2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
SIMC1Q8NDZ2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIMC1Q8NDZ2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SIMC1Q8NDZ2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SIMC1Q8NDZ2 KRT8P11-201ENST00000409686 1436 ntBASIC17.83■□□□□ 0.45
SIMC1Q8NDZ2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.83■□□□□ 0.45
SIMC1Q8NDZ2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 B3GAT3P1-201ENST00000471720 806 ntBASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIMC1Q8NDZ2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 MIR6786-201ENST00000616843 113 ntBASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 AC011298.2-201ENST00000617989 482 ntBASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 AC130371.2-201ENST00000619443 611 ntBASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIMC1Q8NDZ2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 SNORA78-201ENST00000459373 127 ntBASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 NUDT16P1-203ENST00000513809 620 ntBASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIMC1Q8NDZ2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms