Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC28.34■■■□□ 2.13
AFAP1Q8N556 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
AFAP1Q8N556 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
AFAP1Q8N556 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC28.34■■■□□ 2.13
AFAP1Q8N556 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
AFAP1Q8N556 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
AFAP1Q8N556 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.34■■■□□ 2.13
AFAP1Q8N556 RN7SL606P-201ENST00000472779 293 ntBASIC28.34■■■□□ 2.13
AFAP1Q8N556 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.34■■■□□ 2.13
AFAP1Q8N556 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC28.34■■■□□ 2.13
AFAP1Q8N556 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
AFAP1Q8N556 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
AFAP1Q8N556 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
AFAP1Q8N556 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
AFAP1Q8N556 AL109659.2-201ENST00000606809 1674 ntBASIC28.33■■■□□ 2.13
AFAP1Q8N556 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
AFAP1Q8N556 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
AFAP1Q8N556 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
AFAP1Q8N556 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
AFAP1Q8N556 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC28.33■■■□□ 2.13
AFAP1Q8N556 SAPCD2P3-201ENST00000455031 850 ntBASIC28.33■■■□□ 2.13
AFAP1Q8N556 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
AFAP1Q8N556 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
AFAP1Q8N556 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
AFAP1Q8N556 IL9RP2-201ENST00000423948 1312 ntBASIC28.33■■■□□ 2.13
AFAP1Q8N556 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
AFAP1Q8N556 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
AFAP1Q8N556 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC28.33■■■□□ 2.13
AFAP1Q8N556 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
AFAP1Q8N556 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
AFAP1Q8N556 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
AFAP1Q8N556 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
AFAP1Q8N556 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
AFAP1Q8N556 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
AFAP1Q8N556 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC28.32■■■□□ 2.12
AFAP1Q8N556 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
AFAP1Q8N556 PMS2P1-201ENST00000431037 1228 ntBASIC28.32■■■□□ 2.12
AFAP1Q8N556 Z69720.1-201ENST00000601483 472 ntBASIC28.32■■■□□ 2.12
AFAP1Q8N556 AC117500.6-201ENST00000624871 588 ntBASIC28.32■■■□□ 2.12
AFAP1Q8N556 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
AFAP1Q8N556 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC28.32■■■□□ 2.12
AFAP1Q8N556 HOXB1-202ENST00000577092 1414 ntBASIC28.32■■■□□ 2.12
AFAP1Q8N556 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC28.32■■■□□ 2.12
AFAP1Q8N556 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
AFAP1Q8N556 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
AFAP1Q8N556 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
AFAP1Q8N556 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
AFAP1Q8N556 AC099778.1-201ENST00000568593 1911 ntBASIC28.31■■■□□ 2.12
AFAP1Q8N556 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC28.31■■■□□ 2.12
AFAP1Q8N556 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC28.31■■■□□ 2.12
AFAP1Q8N556 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
AFAP1Q8N556 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
AFAP1Q8N556 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC28.31■■■□□ 2.12
AFAP1Q8N556 RPP21-221ENST00000428040 594 ntTSL 2 BASIC28.31■■■□□ 2.12
AFAP1Q8N556 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 AL592071.1-201ENST00000611956 408 ntBASIC28.31■■■□□ 2.12
AFAP1Q8N556 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC28.31■■■□□ 2.12
AFAP1Q8N556 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
AFAP1Q8N556 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
AFAP1Q8N556 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC28.3■■■□□ 2.12
AFAP1Q8N556 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC28.3■■■□□ 2.12
AFAP1Q8N556 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC28.3■■■□□ 2.12
AFAP1Q8N556 IGHV3OR16-7-201ENST00000604106 360 ntBASIC28.3■■■□□ 2.12
AFAP1Q8N556 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
AFAP1Q8N556 CCNC-219ENST00000627680 896 ntTSL 5 BASIC28.3■■■□□ 2.12
AFAP1Q8N556 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC28.3■■■□□ 2.12
AFAP1Q8N556 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC28.3■■■□□ 2.12
AFAP1Q8N556 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
AFAP1Q8N556 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
AFAP1Q8N556 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
AFAP1Q8N556 NSUN5P1-202ENST00000421140 1535 ntBASIC28.29■■■□□ 2.12
AFAP1Q8N556 NSUN5P2-203ENST00000457352 1529 ntBASIC28.29■■■□□ 2.12
AFAP1Q8N556 PALM-208ENST00000592155 2272 ntTSL 4 BASIC28.29■■■□□ 2.12
AFAP1Q8N556 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
AFAP1Q8N556 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC28.29■■■□□ 2.12
AFAP1Q8N556 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC28.29■■■□□ 2.12
AFAP1Q8N556 GPR32P1-201ENST00000601788 811 ntBASIC28.29■■■□□ 2.12
AFAP1Q8N556 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC28.29■■■□□ 2.12
AFAP1Q8N556 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
AFAP1Q8N556 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
AFAP1Q8N556 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
AFAP1Q8N556 RCC2P3-201ENST00000418112 1537 ntBASIC28.28■■■□□ 2.12
AFAP1Q8N556 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms