Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 AC069148.1-201ENST00000608741 768 ntBASIC19.22■□□□□ 0.67
PGBD3Q8N328 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.22■□□□□ 0.67
PGBD3Q8N328 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PGBD3Q8N328 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PGBD3Q8N328 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PGBD3Q8N328 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.22■□□□□ 0.67
PGBD3Q8N328 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.22■□□□□ 0.67
PGBD3Q8N328 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PGBD3Q8N328 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.22■□□□□ 0.67
PGBD3Q8N328 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PGBD3Q8N328 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PGBD3Q8N328 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PGBD3Q8N328 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PGBD3Q8N328 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PGBD3Q8N328 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PGBD3Q8N328 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PGBD3Q8N328 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 GCSHP2-201ENST00000560971 527 ntBASIC19.21■□□□□ 0.67
PGBD3Q8N328 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PGBD3Q8N328 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PGBD3Q8N328 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PGBD3Q8N328 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PGBD3Q8N328 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
PGBD3Q8N328 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PGBD3Q8N328 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.2■□□□□ 0.66
PGBD3Q8N328 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.2■□□□□ 0.66
PGBD3Q8N328 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PGBD3Q8N328 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.2■□□□□ 0.66
PGBD3Q8N328 NEK4P2-201ENST00000580004 1012 ntBASIC19.2■□□□□ 0.66
PGBD3Q8N328 AC116407.4-201ENST00000623319 1061 ntBASIC19.2■□□□□ 0.66
PGBD3Q8N328 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.2■□□□□ 0.66
PGBD3Q8N328 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.2■□□□□ 0.66
PGBD3Q8N328 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PGBD3Q8N328 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.2■□□□□ 0.66
PGBD3Q8N328 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PGBD3Q8N328 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PGBD3Q8N328 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PGBD3Q8N328 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PGBD3Q8N328 LINC01311-201ENST00000565162 1445 ntBASIC19.19■□□□□ 0.66
PGBD3Q8N328 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PGBD3Q8N328 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 ZNF444P1-201ENST00000559497 298 ntBASIC19.19■□□□□ 0.66
PGBD3Q8N328 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PGBD3Q8N328 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PGBD3Q8N328 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
PGBD3Q8N328 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PGBD3Q8N328 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PGBD3Q8N328 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD3Q8N328 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 TCF3P1-201ENST00000423021 1937 ntBASIC19.18■□□□□ 0.66
PGBD3Q8N328 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD3Q8N328 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 AC112907.3-201ENST00000577781 2400 ntBASIC19.18■□□□□ 0.66
PGBD3Q8N328 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD3Q8N328 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD3Q8N328 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD3Q8N328 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.18■□□□□ 0.66
PGBD3Q8N328 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD3Q8N328 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD3Q8N328 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms