Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 AL022342.1-201ENST00000400363 863 ntBASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 AC091607.1-201ENST00000490318 1060 ntBASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 AL160237.2-201ENST00000556165 472 ntBASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 AC138894.3-201ENST00000603787 634 ntBASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 TP73-AS1-207ENST00000624167 988 ntBASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL27A1Q8IZC6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL27A1Q8IZC6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL27A1Q8IZC6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL27A1Q8IZC6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 RNA5SP419-201ENST00000515908 135 ntBASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 Z83836.1-201ENST00000624605 1642 ntBASIC17.83■□□□□ 0.44
COL27A1Q8IZC6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AL157384.1-201ENST00000445995 2473 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AC104819.1-201ENST00000504587 486 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AP000867.3-201ENST00000524675 377 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AP005901.3-202ENST00000581653 237 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 LINC01006-201ENST00000333319 2292 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AC112907.3-201ENST00000577781 2400 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 TREX1-205ENST00000625293 1783 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AL512353.2-201ENST00000448759 1962 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 AL592071.1-201ENST00000611956 408 ntBASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL27A1Q8IZC6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 KRT16P4-201ENST00000453883 522 ntBASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.81■□□□□ 0.44
COL27A1Q8IZC6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms