Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 AC090164.3-201ENST00000610780 2143 ntBASIC18.74■□□□□ 0.59
APLFQ8IW19 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.74■□□□□ 0.59
APLFQ8IW19 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.74■□□□□ 0.59
APLFQ8IW19 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.74■□□□□ 0.59
APLFQ8IW19 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 AC012306.2-201ENST00000609350 630 ntBASIC18.74■□□□□ 0.59
APLFQ8IW19 AL121829.2-201ENST00000620908 328 ntBASIC18.74■□□□□ 0.59
APLFQ8IW19 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
APLFQ8IW19 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.74■□□□□ 0.59
APLFQ8IW19 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
APLFQ8IW19 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
APLFQ8IW19 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.74■□□□□ 0.59
APLFQ8IW19 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.73■□□□□ 0.59
APLFQ8IW19 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 BICD1-207ENST00000551848 1962 ntBASIC18.73■□□□□ 0.59
APLFQ8IW19 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.73■□□□□ 0.59
APLFQ8IW19 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.73■□□□□ 0.59
APLFQ8IW19 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.73■□□□□ 0.59
APLFQ8IW19 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
APLFQ8IW19 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 AL355075.4-201ENST00000554988 638 ntBASIC18.73■□□□□ 0.59
APLFQ8IW19 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.73■□□□□ 0.59
APLFQ8IW19 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.73■□□□□ 0.59
APLFQ8IW19 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
APLFQ8IW19 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
APLFQ8IW19 AC104581.1-202ENST00000635932 2618 ntBASIC18.73■□□□□ 0.59
APLFQ8IW19 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.73■□□□□ 0.59
APLFQ8IW19 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APLFQ8IW19 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
APLFQ8IW19 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
APLFQ8IW19 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.72■□□□□ 0.59
APLFQ8IW19 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
APLFQ8IW19 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
APLFQ8IW19 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
APLFQ8IW19 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.72■□□□□ 0.59
APLFQ8IW19 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.72■□□□□ 0.59
APLFQ8IW19 TSPY15P-201ENST00000457163 923 ntBASIC18.72■□□□□ 0.59
APLFQ8IW19 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.72■□□□□ 0.59
APLFQ8IW19 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.72■□□□□ 0.59
APLFQ8IW19 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.72■□□□□ 0.59
APLFQ8IW19 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.72■□□□□ 0.59
APLFQ8IW19 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.72■□□□□ 0.59
APLFQ8IW19 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.72■□□□□ 0.59
APLFQ8IW19 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
APLFQ8IW19 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APLFQ8IW19 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms