Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RNF135Q8IUD6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RNF135Q8IUD6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RNF135Q8IUD6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF135Q8IUD6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RNF135Q8IUD6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF135Q8IUD6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF135Q8IUD6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.05■□□□□ 0.8
RNF135Q8IUD6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 GCSHP2-201ENST00000560971 527 ntBASIC20.05■□□□□ 0.8
RNF135Q8IUD6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF135Q8IUD6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.04■□□□□ 0.8
RNF135Q8IUD6 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.04■□□□□ 0.8
RNF135Q8IUD6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RNF135Q8IUD6 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 SPDYE13P-201ENST00000445314 798 ntBASIC20.03■□□□□ 0.8
RNF135Q8IUD6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF135Q8IUD6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF135Q8IUD6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF135Q8IUD6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF135Q8IUD6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
RNF135Q8IUD6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF135Q8IUD6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF135Q8IUD6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF135Q8IUD6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF135Q8IUD6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.01■□□□□ 0.79
RNF135Q8IUD6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms