Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PWWP2AP1-201ENST00000429776 2273 ntBASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13BQ7Z7G8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 AC055717.3-201ENST00000622967 595 ntBASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13BQ7Z7G8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 AL391807.1-203ENST00000604392 2365 ntBASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 AL121772.3-201ENST00000610840 674 ntBASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 AC022898.2-201ENST00000616822 1312 ntBASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms