Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RAI1Q7Z5J4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.14■□□□□ 0.18
RAI1Q7Z5J4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAI1Q7Z5J4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.14■□□□□ 0.18
RAI1Q7Z5J4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 AC092597.1-201ENST00000487352 616 ntBASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI1Q7Z5J4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 TPM4P1-201ENST00000436100 807 ntBASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 AC034232.1-201ENST00000506026 1064 ntBASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 IFNL4P1-201ENST00000607083 540 ntBASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI1Q7Z5J4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI1Q7Z5J4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms