Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHMP1BQ7LBR1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHMP1BQ7LBR1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.46■□□□□ 0.38
CHMP1BQ7LBR1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 UNC93B2-201ENST00000285383 730 ntBASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 AP000974.1-201ENST00000623909 2387 ntBASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP1BQ7LBR1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 TNXA-203ENST00000507684 2038 ntBASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 FSCN1P1-201ENST00000568912 1481 ntBASIC17.44■□□□□ 0.38
CHMP1BQ7LBR1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 BX088651.1-201ENST00000540551 451 ntBASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 AL355075.4-201ENST00000554988 638 ntBASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 AC005082.1-201ENST00000413042 2259 ntBASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms