Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CTR9Q6PD62 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC22.47■■□□□ 1.19
CTR9Q6PD62 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
CTR9Q6PD62 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTR9Q6PD62 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.46■■□□□ 1.19
CTR9Q6PD62 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTR9Q6PD62 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CTR9Q6PD62 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CTR9Q6PD62 AL023284.2-201ENST00000405850 579 ntBASIC22.46■■□□□ 1.19
CTR9Q6PD62 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
CTR9Q6PD62 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.46■■□□□ 1.19
CTR9Q6PD62 CR769767.2-201ENST00000622735 460 ntBASIC22.46■■□□□ 1.19
CTR9Q6PD62 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTR9Q6PD62 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CTR9Q6PD62 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CTR9Q6PD62 AC005332.7-201ENST00000614046 2005 ntBASIC22.46■■□□□ 1.19
CTR9Q6PD62 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CTR9Q6PD62 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTR9Q6PD62 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.46■■□□□ 1.19
CTR9Q6PD62 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CTR9Q6PD62 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
CTR9Q6PD62 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 AC116562.4-201ENST00000641316 2276 ntBASIC22.45■■□□□ 1.18
CTR9Q6PD62 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 AK4P3-201ENST00000418260 669 ntBASIC22.45■■□□□ 1.18
CTR9Q6PD62 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 COX11P1-201ENST00000489116 835 ntBASIC22.45■■□□□ 1.18
CTR9Q6PD62 YBX1P2-201ENST00000489612 999 ntBASIC22.45■■□□□ 1.18
CTR9Q6PD62 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 WWOX-216ENST00000569818 525 ntBASIC22.45■■□□□ 1.18
CTR9Q6PD62 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 AL445228.2-201ENST00000605589 952 ntBASIC22.45■■□□□ 1.18
CTR9Q6PD62 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.45■■□□□ 1.18
CTR9Q6PD62 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CTR9Q6PD62 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 KRT18P35-201ENST00000510488 1269 ntBASIC22.44■■□□□ 1.18
CTR9Q6PD62 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.44■■□□□ 1.18
CTR9Q6PD62 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CTR9Q6PD62 AC011558.1-201ENST00000623459 338 ntBASIC22.44■■□□□ 1.18
CTR9Q6PD62 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CTR9Q6PD62 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CTR9Q6PD62 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CTR9Q6PD62 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CTR9Q6PD62 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.43■■□□□ 1.18
CTR9Q6PD62 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CTR9Q6PD62 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.43■■□□□ 1.18
CTR9Q6PD62 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms