Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 KRT8P8-201ENST00000434750 1448 ntBASIC21.97■■□□□ 1.11
CCDC144BQ3MJ40 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC144BQ3MJ40 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CCDC144BQ3MJ40 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 AC139887.4-201ENST00000607877 719 ntBASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 AL032819.2-201ENST00000624543 2162 ntBASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCDC144BQ3MJ40 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
CCDC144BQ3MJ40 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CCDC144BQ3MJ40 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CCDC144BQ3MJ40 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 LETM1P2-201ENST00000597330 2178 ntBASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 AC007663.1-201ENST00000438948 1240 ntBASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 LINC01238-205ENST00000567549 1107 ntBASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC144BQ3MJ40 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC144BQ3MJ40 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 RNF152P1-201ENST00000397754 604 ntBASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 AC010653.2-201ENST00000623505 997 ntBASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 AL358472.4-201ENST00000633140 710 ntBASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CCDC144BQ3MJ40 AC005082.1-201ENST00000413042 2259 ntBASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 AC092338.2-201ENST00000568827 1415 ntBASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms