Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.72■□□□□ 0.43
RPS3AP61247 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.72■□□□□ 0.43
RPS3AP61247 AC093827.2-201ENST00000512654 315 ntBASIC17.72■□□□□ 0.43
RPS3AP61247 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.72■□□□□ 0.43
RPS3AP61247 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.72■□□□□ 0.43
RPS3AP61247 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.72■□□□□ 0.43
RPS3AP61247 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.72■□□□□ 0.43
RPS3AP61247 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.72■□□□□ 0.43
RPS3AP61247 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
RPS3AP61247 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RPS3AP61247 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RPS3AP61247 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RPS3AP61247 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 AL135905.2-201ENST00000584934 1404 ntBASIC17.72■□□□□ 0.43
RPS3AP61247 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
RPS3AP61247 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
RPS3AP61247 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.71■□□□□ 0.43
RPS3AP61247 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.71■□□□□ 0.43
RPS3AP61247 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.71■□□□□ 0.43
RPS3AP61247 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.71■□□□□ 0.43
RPS3AP61247 KRT16P5-201ENST00000455284 522 ntBASIC17.71■□□□□ 0.43
RPS3AP61247 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.71■□□□□ 0.43
RPS3AP61247 AC008550.1-201ENST00000511500 884 ntBASIC17.71■□□□□ 0.43
RPS3AP61247 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RPS3AP61247 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.71■□□□□ 0.43
RPS3AP61247 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS3AP61247 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPS3AP61247 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RPS3AP61247 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS3AP61247 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RPS3AP61247 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS3AP61247 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS3AP61247 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RPS3AP61247 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RPS3AP61247 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RPS3AP61247 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.7■□□□□ 0.42
RPS3AP61247 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.7■□□□□ 0.42
RPS3AP61247 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.7■□□□□ 0.42
RPS3AP61247 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS3AP61247 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.7■□□□□ 0.42
RPS3AP61247 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RPS3AP61247 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RPS3AP61247 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS3AP61247 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RPS3AP61247 TFP1-202ENST00000475455 1573 ntBASIC17.7■□□□□ 0.42
RPS3AP61247 AP001271.2-201ENST00000624018 1556 ntBASIC17.7■□□□□ 0.42
RPS3AP61247 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS3AP61247 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS3AP61247 TNRC18P3-201ENST00000441896 2691 ntBASIC17.69■□□□□ 0.42
RPS3AP61247 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS3AP61247 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.69■□□□□ 0.42
RPS3AP61247 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS3AP61247 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS3AP61247 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS3AP61247 AP001412.1-201ENST00000608405 714 ntBASIC17.69■□□□□ 0.42
RPS3AP61247 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms