Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.97■□□□□ 0.31
GFRA1P56159 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.96■□□□□ 0.31
GFRA1P56159 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA1P56159 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GFRA1P56159 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA1P56159 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA1P56159 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA1P56159 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA1P56159 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
GFRA1P56159 AC009947.2-201ENST00000444014 672 ntBASIC16.96■□□□□ 0.31
GFRA1P56159 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.96■□□□□ 0.31
GFRA1P56159 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
GFRA1P56159 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA1P56159 AL590326.2-201ENST00000625139 305 ntBASIC16.96■□□□□ 0.31
GFRA1P56159 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA1P56159 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA1P56159 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.96■□□□□ 0.31
GFRA1P56159 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
GFRA1P56159 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.96■□□□□ 0.3
GFRA1P56159 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.96■□□□□ 0.3
GFRA1P56159 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
GFRA1P56159 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GFRA1P56159 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GFRA1P56159 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 AL109659.2-201ENST00000606809 1674 ntBASIC16.95■□□□□ 0.3
GFRA1P56159 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.95■□□□□ 0.3
GFRA1P56159 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 KRT8P32-201ENST00000512863 1461 ntBASIC16.95■□□□□ 0.3
GFRA1P56159 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.95■□□□□ 0.3
GFRA1P56159 RNF152P1-201ENST00000397754 604 ntBASIC16.95■□□□□ 0.3
GFRA1P56159 AP000523.1-201ENST00000398242 1049 ntBASIC16.95■□□□□ 0.3
GFRA1P56159 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.95■□□□□ 0.3
GFRA1P56159 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.95■□□□□ 0.3
GFRA1P56159 AC063952.2-201ENST00000498792 1227 ntBASIC16.95■□□□□ 0.3
GFRA1P56159 MIR3180-5-201ENST00000583743 153 ntBASIC16.95■□□□□ 0.3
GFRA1P56159 AC011558.1-201ENST00000623459 338 ntBASIC16.95■□□□□ 0.3
GFRA1P56159 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.95■□□□□ 0.3
GFRA1P56159 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.95■□□□□ 0.3
GFRA1P56159 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 RCC2P3-201ENST00000418112 1537 ntBASIC16.95■□□□□ 0.3
GFRA1P56159 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.95■□□□□ 0.3
GFRA1P56159 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
GFRA1P56159 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA1P56159 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA1P56159 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GFRA1P56159 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.94■□□□□ 0.3
GFRA1P56159 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.94■□□□□ 0.3
GFRA1P56159 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA1P56159 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
GFRA1P56159 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.94■□□□□ 0.3
GFRA1P56159 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.94■□□□□ 0.3
GFRA1P56159 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA1P56159 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 TSPY5P-201ENST00000426936 936 ntBASIC16.94■□□□□ 0.3
GFRA1P56159 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GFRA1P56159 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA1P56159 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.94■□□□□ 0.3
GFRA1P56159 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.94■□□□□ 0.3
GFRA1P56159 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.94■□□□□ 0.3
GFRA1P56159 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA1P56159 AL161938.1-201ENST00000569833 2180 ntBASIC16.94■□□□□ 0.3
GFRA1P56159 AC036111.1-201ENST00000533973 1582 ntBASIC16.94■□□□□ 0.3
GFRA1P56159 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
GFRA1P56159 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.93■□□□□ 0.3
GFRA1P56159 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.93■□□□□ 0.3
GFRA1P56159 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GFRA1P56159 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
GFRA1P56159 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 AL023973.1-201ENST00000624619 620 ntBASIC16.93■□□□□ 0.3
GFRA1P56159 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms