Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PMS1P54277 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.84■□□□□ 0.93
PMS1P54277 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PMS1P54277 PRORSD1P-201ENST00000295112 541 ntBASIC20.84■□□□□ 0.93
PMS1P54277 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PMS1P54277 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.84■□□□□ 0.93
PMS1P54277 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS1P54277 CR392000.1-201ENST00000624770 1228 ntBASIC20.84■□□□□ 0.93
PMS1P54277 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PMS1P54277 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PMS1P54277 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.83■□□□□ 0.93
PMS1P54277 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.83■□□□□ 0.93
PMS1P54277 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.83■□□□□ 0.93
PMS1P54277 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PMS1P54277 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PMS1P54277 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PMS1P54277 ITM2C-210ENST00000620962 501 ntBASIC20.83■□□□□ 0.93
PMS1P54277 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.83■□□□□ 0.93
PMS1P54277 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PMS1P54277 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PMS1P54277 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PMS1P54277 AL499627.1-201ENST00000569373 2188 ntBASIC20.83■□□□□ 0.92
PMS1P54277 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PMS1P54277 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.83■□□□□ 0.92
PMS1P54277 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PMS1P54277 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.82■□□□□ 0.92
PMS1P54277 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.82■□□□□ 0.92
PMS1P54277 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PMS1P54277 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.82■□□□□ 0.92
PMS1P54277 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 KRT16P1-201ENST00000399124 1418 ntBASIC20.82■□□□□ 0.92
PMS1P54277 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PMS1P54277 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.82■□□□□ 0.92
PMS1P54277 AC011506.1-201ENST00000474329 610 ntBASIC20.82■□□□□ 0.92
PMS1P54277 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PMS1P54277 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.82■□□□□ 0.92
PMS1P54277 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.82■□□□□ 0.92
PMS1P54277 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.82■□□□□ 0.92
PMS1P54277 HEIH-201ENST00000623091 1652 ntBASIC20.82■□□□□ 0.92
PMS1P54277 MTMR9LP-203ENST00000426597 1545 ntBASIC20.82■□□□□ 0.92
PMS1P54277 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.82■□□□□ 0.92
PMS1P54277 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.82■□□□□ 0.92
PMS1P54277 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.82■□□□□ 0.92
PMS1P54277 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS1P54277 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
PMS1P54277 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PMS1P54277 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
PMS1P54277 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PMS1P54277 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.81■□□□□ 0.92
PMS1P54277 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PMS1P54277 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.81■□□□□ 0.92
PMS1P54277 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 AC098590.1-201ENST00000468126 897 ntBASIC20.81■□□□□ 0.92
PMS1P54277 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PMS1P54277 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.81■□□□□ 0.92
PMS1P54277 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 RARRES2P10-201ENST00000564312 460 ntBASIC20.81■□□□□ 0.92
PMS1P54277 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.81■□□□□ 0.92
PMS1P54277 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PMS1P54277 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PMS1P54277 AC126763.1-201ENST00000552015 2118 ntBASIC20.81■□□□□ 0.92
PMS1P54277 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.81■□□□□ 0.92
PMS1P54277 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.81■□□□□ 0.92
PMS1P54277 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS1P54277 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms