Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC9A3P48764 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC9A3P48764 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC9A3P48764 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC9A3P48764 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC9A3P48764 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC9A3P48764 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC9A3P48764 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC9A3P48764 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC9A3P48764 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC9A3P48764 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLC9A3P48764 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLC9A3P48764 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLC9A3P48764 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.34■□□□□ 0.37
SLC9A3P48764 FEM1AP3-201ENST00000403722 1741 ntBASIC17.34■□□□□ 0.37
SLC9A3P48764 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLC9A3P48764 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC9A3P48764 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.34■□□□□ 0.37
SLC9A3P48764 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 UNC93B5-201ENST00000530315 699 ntBASIC17.34■□□□□ 0.37
SLC9A3P48764 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SLC9A3P48764 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC9A3P48764 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC9A3P48764 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC9A3P48764 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC9A3P48764 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLC9A3P48764 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 HTR7P1-202ENST00000624664 4411 ntBASIC17.34■□□□□ 0.37
SLC9A3P48764 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC9A3P48764 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC9A3P48764 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC9A3P48764 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC9A3P48764 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SLC9A3P48764 PCDHB18P-201ENST00000524813 2368 ntBASIC17.33■□□□□ 0.37
SLC9A3P48764 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC9A3P48764 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SLC9A3P48764 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SLC9A3P48764 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC9A3P48764 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC9A3P48764 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC9A3P48764 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SLC9A3P48764 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SLC9A3P48764 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SLC9A3P48764 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC9A3P48764 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC9A3P48764 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
SLC9A3P48764 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC9A3P48764 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC9A3P48764 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC9A3P48764 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC9A3P48764 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
SLC9A3P48764 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC9A3P48764 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SLC9A3P48764 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC9A3P48764 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SLC9A3P48764 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SLC9A3P48764 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC9A3P48764 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC9A3P48764 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC9A3P48764 AC090164.3-201ENST00000610780 2143 ntBASIC17.33■□□□□ 0.36
SLC9A3P48764 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
SLC9A3P48764 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC9A3P48764 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC9A3P48764 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC9A3P48764 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SLC9A3P48764 AC093525.10-201ENST00000625130 1569 ntBASIC17.32■□□□□ 0.36
SLC9A3P48764 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms