Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.06□□□□□ -0.32
RPL13AP40429 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.06□□□□□ -0.32
RPL13AP40429 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RPL13AP40429 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.06□□□□□ -0.32
RPL13AP40429 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RPL13AP40429 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
RPL13AP40429 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RPL13AP40429 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
RPL13AP40429 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.06□□□□□ -0.32
RPL13AP40429 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.06□□□□□ -0.32
RPL13AP40429 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RPL13AP40429 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.06□□□□□ -0.32
RPL13AP40429 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.06□□□□□ -0.32
RPL13AP40429 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
RPL13AP40429 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
RPL13AP40429 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.06□□□□□ -0.32
RPL13AP40429 TSPY26P-201ENST00000476365 1326 ntBASIC13.06□□□□□ -0.32
RPL13AP40429 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL13AP40429 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
RPL13AP40429 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL13AP40429 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 AC124067.4-201ENST00000519691 2379 ntBASIC13.05□□□□□ -0.32
RPL13AP40429 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RPL13AP40429 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL13AP40429 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL13AP40429 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.05□□□□□ -0.32
RPL13AP40429 RARRES2P6-201ENST00000567333 442 ntBASIC13.05□□□□□ -0.32
RPL13AP40429 AC010525.1-201ENST00000585559 441 ntBASIC13.05□□□□□ -0.32
RPL13AP40429 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL13AP40429 AL354811.1-201ENST00000610286 706 ntBASIC13.05□□□□□ -0.32
RPL13AP40429 MIR2861-201ENST00000636310 90 ntBASIC13.05□□□□□ -0.32
RPL13AP40429 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RPL13AP40429 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RPL13AP40429 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.05□□□□□ -0.32
RPL13AP40429 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
RPL13AP40429 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.05□□□□□ -0.32
RPL13AP40429 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL13AP40429 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RPL13AP40429 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RPL13AP40429 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RPL13AP40429 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RPL13AP40429 AC009053.2-201ENST00000563701 2365 ntBASIC13.05□□□□□ -0.32
RPL13AP40429 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL13AP40429 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RPL13AP40429 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms