Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL15A1P39059 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.02■■□□□ 1.44
COL15A1P39059 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.02■■□□□ 1.44
COL15A1P39059 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL15A1P39059 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL15A1P39059 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.02■■□□□ 1.44
COL15A1P39059 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
COL15A1P39059 AL157888.1-201ENST00000631930 593 ntBASIC24.02■■□□□ 1.44
COL15A1P39059 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL15A1P39059 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
COL15A1P39059 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC24.01■■□□□ 1.43
COL15A1P39059 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.01■■□□□ 1.43
COL15A1P39059 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 FDX1P1-201ENST00000449115 551 ntBASIC24.01■■□□□ 1.43
COL15A1P39059 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.01■■□□□ 1.43
COL15A1P39059 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL15A1P39059 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.01■■□□□ 1.43
COL15A1P39059 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.01■■□□□ 1.43
COL15A1P39059 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24■■□□□ 1.43
COL15A1P39059 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
COL15A1P39059 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24■■□□□ 1.43
COL15A1P39059 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24■■□□□ 1.43
COL15A1P39059 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24■■□□□ 1.43
COL15A1P39059 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL15A1P39059 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24■■□□□ 1.43
COL15A1P39059 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL15A1P39059 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24■■□□□ 1.43
COL15A1P39059 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24■■□□□ 1.43
COL15A1P39059 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24■■□□□ 1.43
COL15A1P39059 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24■■□□□ 1.43
COL15A1P39059 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL15A1P39059 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL15A1P39059 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC24■■□□□ 1.43
COL15A1P39059 UNC93B7-201ENST00000509439 705 ntBASIC24■■□□□ 1.43
COL15A1P39059 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24■■□□□ 1.43
COL15A1P39059 KRT8P26-201ENST00000534154 1276 ntBASIC24■■□□□ 1.43
COL15A1P39059 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24■■□□□ 1.43
COL15A1P39059 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
COL15A1P39059 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
COL15A1P39059 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24■■□□□ 1.43
COL15A1P39059 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24■■□□□ 1.43
COL15A1P39059 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC24■■□□□ 1.43
COL15A1P39059 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24■■□□□ 1.43
COL15A1P39059 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.99■■□□□ 1.43
COL15A1P39059 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.99■■□□□ 1.43
COL15A1P39059 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
COL15A1P39059 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.99■■□□□ 1.43
COL15A1P39059 PCDHAC2-203ENST00000615316 3011 ntBASIC23.99■■□□□ 1.43
COL15A1P39059 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 AC004870.1-201ENST00000315132 882 ntBASIC23.99■■□□□ 1.43
COL15A1P39059 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.99■■□□□ 1.43
COL15A1P39059 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.99■■□□□ 1.43
COL15A1P39059 AL136038.4-201ENST00000603606 1261 ntBASIC23.99■■□□□ 1.43
COL15A1P39059 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
COL15A1P39059 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
COL15A1P39059 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.99■■□□□ 1.43
COL15A1P39059 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.99■■□□□ 1.43
COL15A1P39059 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
COL15A1P39059 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL15A1P39059 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
COL15A1P39059 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.98■■□□□ 1.43
COL15A1P39059 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
COL15A1P39059 AL845331.1-201ENST00000424978 1190 ntBASIC23.98■■□□□ 1.43
COL15A1P39059 CHCHD2P8-201ENST00000429873 447 ntBASIC23.98■■□□□ 1.43
COL15A1P39059 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.98■■□□□ 1.43
COL15A1P39059 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL15A1P39059 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
COL15A1P39059 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.97■■□□□ 1.43
COL15A1P39059 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms