Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.34■■□□□ 1.33
PDE6BP35913 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.34■■□□□ 1.33
PDE6BP35913 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.34■■□□□ 1.33
PDE6BP35913 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PDE6BP35913 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDE6BP35913 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDE6BP35913 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDE6BP35913 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDE6BP35913 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.33■■□□□ 1.33
PDE6BP35913 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PDE6BP35913 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDE6BP35913 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.33■■□□□ 1.33
PDE6BP35913 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.33■■□□□ 1.33
PDE6BP35913 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.33■■□□□ 1.33
PDE6BP35913 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.33■■□□□ 1.33
PDE6BP35913 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.33■■□□□ 1.33
PDE6BP35913 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
PDE6BP35913 AL390719.2-201ENST00000606993 987 ntBASIC23.33■■□□□ 1.33
PDE6BP35913 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDE6BP35913 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PDE6BP35913 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDE6BP35913 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PDE6BP35913 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDE6BP35913 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDE6BP35913 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
PDE6BP35913 AL109659.2-201ENST00000606809 1674 ntBASIC23.32■■□□□ 1.32
PDE6BP35913 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE6BP35913 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
PDE6BP35913 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE6BP35913 AC233702.3-201ENST00000578656 1387 ntBASIC23.32■■□□□ 1.32
PDE6BP35913 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDE6BP35913 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDE6BP35913 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.32■■□□□ 1.32
PDE6BP35913 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.32■■□□□ 1.32
PDE6BP35913 Z69720.1-201ENST00000601483 472 ntBASIC23.32■■□□□ 1.32
PDE6BP35913 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE6BP35913 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PDE6BP35913 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE6BP35913 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDE6BP35913 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.32■■□□□ 1.32
PDE6BP35913 HOXB1-202ENST00000577092 1414 ntBASIC23.32■■□□□ 1.32
PDE6BP35913 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDE6BP35913 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PDE6BP35913 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
PDE6BP35913 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDE6BP35913 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.31■■□□□ 1.32
PDE6BP35913 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.31■■□□□ 1.32
PDE6BP35913 AC099336.1-202ENST00000602961 463 ntBASIC23.31■■□□□ 1.32
PDE6BP35913 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.31■■□□□ 1.32
PDE6BP35913 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE6BP35913 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDE6BP35913 LINC00167-201ENST00000530583 1419 ntBASIC23.31■■□□□ 1.32
PDE6BP35913 HLA-A-201ENST00000376802 1334 ntBASIC23.31■■□□□ 1.32
PDE6BP35913 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.3■■□□□ 1.32
PDE6BP35913 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.3■■□□□ 1.32
PDE6BP35913 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.3■■□□□ 1.32
PDE6BP35913 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PDE6BP35913 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.3■■□□□ 1.32
PDE6BP35913 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.3■■□□□ 1.32
PDE6BP35913 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.3■■□□□ 1.32
PDE6BP35913 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.3■■□□□ 1.32
PDE6BP35913 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.3■■□□□ 1.32
PDE6BP35913 BX640515.1-201ENST00000617215 977 ntBASIC23.3■■□□□ 1.32
PDE6BP35913 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE6BP35913 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PDE6BP35913 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PDE6BP35913 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PDE6BP35913 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PDE6BP35913 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE6BP35913 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE6BP35913 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE6BP35913 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE6BP35913 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.29■■□□□ 1.32
PDE6BP35913 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDE6BP35913 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.29■■□□□ 1.32
PDE6BP35913 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.29■■□□□ 1.32
PDE6BP35913 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.29■■□□□ 1.32
PDE6BP35913 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.29■■□□□ 1.32
PDE6BP35913 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.29■■□□□ 1.32
PDE6BP35913 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.29■■□□□ 1.32
PDE6BP35913 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE6BP35913 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.28■■□□□ 1.32
PDE6BP35913 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDE6BP35913 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE6BP35913 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDE6BP35913 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE6BP35913 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE6BP35913 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PDE6BP35913 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms