Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC8P31273 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXC8P31273 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXC8P31273 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC8P31273 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC8P31273 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC8P31273 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC8P31273 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HOXC8P31273 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC8P31273 IRX1P1-201ENST00000438849 1838 ntBASIC20.67■□□□□ 0.9
HOXC8P31273 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.67■□□□□ 0.9
HOXC8P31273 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC8P31273 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXC8P31273 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
HOXC8P31273 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC8P31273 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXC8P31273 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXC8P31273 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXC8P31273 RNF126P1-202ENST00000569893 925 ntBASIC20.67■□□□□ 0.9
HOXC8P31273 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXC8P31273 MIR3652-201ENST00000579335 131 ntBASIC20.67■□□□□ 0.9
HOXC8P31273 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXC8P31273 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC8P31273 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXC8P31273 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HOXC8P31273 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC8P31273 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HOXC8P31273 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC8P31273 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXC8P31273 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
HOXC8P31273 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
HOXC8P31273 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
HOXC8P31273 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HOXC8P31273 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXC8P31273 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HOXC8P31273 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC8P31273 CHCHD2P8-201ENST00000429873 447 ntBASIC20.66■□□□□ 0.9
HOXC8P31273 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXC8P31273 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXC8P31273 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC8P31273 AP002414.4-201ENST00000589764 1148 ntBASIC20.66■□□□□ 0.9
HOXC8P31273 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXC8P31273 AL691432.3-201ENST00000621860 400 ntBASIC20.66■□□□□ 0.9
HOXC8P31273 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
HOXC8P31273 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.66■□□□□ 0.9
HOXC8P31273 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXC8P31273 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC8P31273 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC8P31273 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
HOXC8P31273 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXC8P31273 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC8P31273 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC8P31273 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXC8P31273 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HOXC8P31273 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXC8P31273 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXC8P31273 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXC8P31273 MIR3180-4-201ENST00000582223 153 ntBASIC20.65■□□□□ 0.9
HOXC8P31273 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HOXC8P31273 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXC8P31273 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXC8P31273 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXC8P31273 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HOXC8P31273 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC8P31273 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC8P31273 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.64■□□□□ 0.9
HOXC8P31273 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOXC8P31273 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HOXC8P31273 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXC8P31273 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXC8P31273 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms