Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA9P31269 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HOXA9P31269 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA9P31269 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA9P31269 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA9P31269 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA9P31269 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.7■□□□□ 0.74
HOXA9P31269 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA9P31269 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HOXA9P31269 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA9P31269 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HOXA9P31269 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXA9P31269 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA9P31269 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.7■□□□□ 0.74
HOXA9P31269 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA9P31269 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA9P31269 AL157888.1-201ENST00000631930 593 ntBASIC19.7■□□□□ 0.74
HOXA9P31269 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXA9P31269 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA9P31269 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HOXA9P31269 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 HOXB1-202ENST00000577092 1414 ntBASIC19.69■□□□□ 0.74
HOXA9P31269 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA9P31269 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA9P31269 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 AP002383.4-201ENST00000442518 975 ntBASIC19.69■□□□□ 0.74
HOXA9P31269 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXA9P31269 PRELID1P1-202ENST00000567272 903 ntBASIC19.69■□□□□ 0.74
HOXA9P31269 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA9P31269 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA9P31269 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA9P31269 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA9P31269 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA9P31269 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HOXA9P31269 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA9P31269 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HOXA9P31269 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA9P31269 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXA9P31269 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 LINC01006-201ENST00000333319 2292 ntBASIC19.68■□□□□ 0.74
HOXA9P31269 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 AL391807.1-203ENST00000604392 2365 ntBASIC19.68■□□□□ 0.74
HOXA9P31269 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA9P31269 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA9P31269 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA9P31269 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA9P31269 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA9P31269 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA9P31269 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA9P31269 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA9P31269 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HOXA9P31269 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA9P31269 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA9P31269 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXA9P31269 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXA9P31269 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HOXA9P31269 Z82202.1-201ENST00000623446 1880 ntBASIC19.67■□□□□ 0.74
HOXA9P31269 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HOXA9P31269 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA9P31269 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA9P31269 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXA9P31269 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HOXA9P31269 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA9P31269 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA9P31269 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HOXA9P31269 CHCHD2P8-201ENST00000429873 447 ntBASIC19.67■□□□□ 0.74
HOXA9P31269 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA9P31269 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA9P31269 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA9P31269 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.67■□□□□ 0.74
HOXA9P31269 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA9P31269 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXA9P31269 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA9P31269 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA9P31269 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA9P31269 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
HOXA9P31269 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXA9P31269 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms