Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC011506.1-201ENST00000474329 610 ntBASIC21.8■■□□□ 1.08
ATP2B1P20020 AC091390.4-202ENST00000476426 537 ntBASIC21.8■■□□□ 1.08
ATP2B1P20020 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP2B1P20020 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2B1P20020 AL031985.4-201ENST00000642138 673 ntBASIC21.8■■□□□ 1.08
ATP2B1P20020 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2B1P20020 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2B1P20020 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ATP2B1P20020 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2B1P20020 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2B1P20020 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2B1P20020 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.8■■□□□ 1.08
ATP2B1P20020 FEM1AP3-201ENST00000403722 1741 ntBASIC21.8■■□□□ 1.08
ATP2B1P20020 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2B1P20020 AC093503.3-201ENST00000624917 2352 ntBASIC21.8■■□□□ 1.08
ATP2B1P20020 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP2B1P20020 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP2B1P20020 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP2B1P20020 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
ATP2B1P20020 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
ATP2B1P20020 AC006333.2-201ENST00000607957 2099 ntBASIC21.79■■□□□ 1.08
ATP2B1P20020 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP2B1P20020 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ATP2B1P20020 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP2B1P20020 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.79■■□□□ 1.08
ATP2B1P20020 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.79■■□□□ 1.08
ATP2B1P20020 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ATP2B1P20020 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
ATP2B1P20020 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 AL135905.2-201ENST00000584934 1404 ntBASIC21.79■■□□□ 1.08
ATP2B1P20020 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP2B1P20020 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
ATP2B1P20020 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ATP2B1P20020 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP2B1P20020 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
ATP2B1P20020 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ATP2B1P20020 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP2B1P20020 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP2B1P20020 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.78■■□□□ 1.08
ATP2B1P20020 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP2B1P20020 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATP2B1P20020 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.78■■□□□ 1.08
ATP2B1P20020 AC011298.2-201ENST00000617989 482 ntBASIC21.78■■□□□ 1.08
ATP2B1P20020 AC113410.3-201ENST00000623366 203 ntBASIC21.78■■□□□ 1.08
ATP2B1P20020 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
ATP2B1P20020 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
ATP2B1P20020 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP2B1P20020 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATP2B1P20020 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ATP2B1P20020 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
ATP2B1P20020 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP2B1P20020 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.77■■□□□ 1.08
ATP2B1P20020 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
ATP2B1P20020 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B1P20020 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B1P20020 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B1P20020 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP2B1P20020 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B1P20020 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ATP2B1P20020 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B1P20020 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP2B1P20020 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B1P20020 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B1P20020 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B1P20020 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP2B1P20020 AC004951.3-201ENST00000418645 1148 ntBASIC21.77■■□□□ 1.08
ATP2B1P20020 TSPY21P-201ENST00000433481 731 ntBASIC21.77■■□□□ 1.08
ATP2B1P20020 AC008550.1-201ENST00000511500 884 ntBASIC21.77■■□□□ 1.08
ATP2B1P20020 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.77■■□□□ 1.08
ATP2B1P20020 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP2B1P20020 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms