Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HOXC6P09630 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.4■■□□□ 1.02
HOXC6P09630 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.4■■□□□ 1.02
HOXC6P09630 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HOXC6P09630 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
HOXC6P09630 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.4■■□□□ 1.02
HOXC6P09630 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.4■■□□□ 1.02
HOXC6P09630 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.4■■□□□ 1.02
HOXC6P09630 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
HOXC6P09630 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC6P09630 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
HOXC6P09630 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC6P09630 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.39■■□□□ 1.01
HOXC6P09630 TSPY22P-201ENST00000427496 604 ntBASIC21.39■■□□□ 1.01
HOXC6P09630 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HOXC6P09630 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.39■■□□□ 1.01
HOXC6P09630 TPSP2-201ENST00000561760 610 ntBASIC21.39■■□□□ 1.01
HOXC6P09630 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.39■■□□□ 1.01
HOXC6P09630 IFNL4P1-201ENST00000607083 540 ntBASIC21.39■■□□□ 1.01
HOXC6P09630 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC6P09630 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC6P09630 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC6P09630 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
HOXC6P09630 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC6P09630 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC6P09630 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC6P09630 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC6P09630 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.38■■□□□ 1.01
HOXC6P09630 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.38■■□□□ 1.01
HOXC6P09630 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.38■■□□□ 1.01
HOXC6P09630 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.38■■□□□ 1.01
HOXC6P09630 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.38■■□□□ 1.01
HOXC6P09630 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HOXC6P09630 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC6P09630 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.37■■□□□ 1.01
HOXC6P09630 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
HOXC6P09630 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 KRT18P1-202ENST00000452408 1331 ntBASIC21.37■■□□□ 1.01
HOXC6P09630 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.37■■□□□ 1.01
HOXC6P09630 AP000347.1-202ENST00000435868 847 ntBASIC21.37■■□□□ 1.01
HOXC6P09630 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.37■■□□□ 1.01
HOXC6P09630 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HOXC6P09630 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.37■■□□□ 1.01
HOXC6P09630 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.37■■□□□ 1.01
HOXC6P09630 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HOXC6P09630 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.37■■□□□ 1.01
HOXC6P09630 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC6P09630 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
HOXC6P09630 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.37■■□□□ 1.01
HOXC6P09630 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
HOXC6P09630 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
HOXC6P09630 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.36■■□□□ 1.01
HOXC6P09630 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.36■■□□□ 1.01
HOXC6P09630 RNF126P1-202ENST00000569893 925 ntBASIC21.36■■□□□ 1.01
HOXC6P09630 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HOXC6P09630 AC104692.2-201ENST00000603054 253 ntBASIC21.36■■□□□ 1.01
HOXC6P09630 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
HOXC6P09630 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
HOXC6P09630 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms