Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
COL5A2P05997 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
COL5A2P05997 TCF3P1-201ENST00000423021 1937 ntBASIC24.93■■□□□ 1.58
COL5A2P05997 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC24.93■■□□□ 1.58
COL5A2P05997 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
COL5A2P05997 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC24.93■■□□□ 1.58
COL5A2P05997 IGHGP-201ENST00000390555 1178 ntBASIC24.93■■□□□ 1.58
COL5A2P05997 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC24.93■■□□□ 1.58
COL5A2P05997 AL590627.1-203ENST00000421194 1026 ntBASIC24.93■■□□□ 1.58
COL5A2P05997 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 AC091607.1-201ENST00000490318 1060 ntBASIC24.93■■□□□ 1.58
COL5A2P05997 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
COL5A2P05997 AF238378.1-201ENST00000526806 358 ntBASIC24.93■■□□□ 1.58
COL5A2P05997 SLC25A1P1-201ENST00000528351 927 ntBASIC24.93■■□□□ 1.58
COL5A2P05997 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.93■■□□□ 1.58
COL5A2P05997 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC24.93■■□□□ 1.58
COL5A2P05997 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
COL5A2P05997 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
COL5A2P05997 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL5A2P05997 NSUN5P1-202ENST00000421140 1535 ntBASIC24.93■■□□□ 1.58
COL5A2P05997 NSUN5P2-203ENST00000457352 1529 ntBASIC24.93■■□□□ 1.58
COL5A2P05997 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.93■■□□□ 1.58
COL5A2P05997 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
COL5A2P05997 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL5A2P05997 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL5A2P05997 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL5A2P05997 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL5A2P05997 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC24.92■■□□□ 1.58
COL5A2P05997 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
COL5A2P05997 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC24.92■■□□□ 1.58
COL5A2P05997 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC24.92■■□□□ 1.58
COL5A2P05997 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.92■■□□□ 1.58
COL5A2P05997 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL5A2P05997 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
COL5A2P05997 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC24.91■■□□□ 1.58
COL5A2P05997 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC24.91■■□□□ 1.58
COL5A2P05997 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC24.91■■□□□ 1.58
COL5A2P05997 IL9RP2-201ENST00000423948 1312 ntBASIC24.91■■□□□ 1.58
COL5A2P05997 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC24.91■■□□□ 1.58
COL5A2P05997 PBK-203ENST00000522944 1499 ntTSL 2 BASIC24.91■■□□□ 1.58
COL5A2P05997 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.91■■□□□ 1.58
COL5A2P05997 AL512353.2-201ENST00000448759 1962 ntBASIC24.91■■□□□ 1.58
COL5A2P05997 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL5A2P05997 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.91■■□□□ 1.58
COL5A2P05997 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL5A2P05997 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL5A2P05997 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC24.9■■□□□ 1.58
COL5A2P05997 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL5A2P05997 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL5A2P05997 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL5A2P05997 LSM5-204ENST00000409909 740 ntTSL 2 BASIC24.9■■□□□ 1.58
COL5A2P05997 NUS1P2-201ENST00000417358 873 ntBASIC24.9■■□□□ 1.58
COL5A2P05997 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
COL5A2P05997 RN7SL606P-201ENST00000472779 293 ntBASIC24.9■■□□□ 1.58
COL5A2P05997 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC24.9■■□□□ 1.58
COL5A2P05997 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL5A2P05997 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.9■■□□□ 1.58
COL5A2P05997 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC24.9■■□□□ 1.58
COL5A2P05997 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC24.9■■□□□ 1.58
COL5A2P05997 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL5A2P05997 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL5A2P05997 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL5A2P05997 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
COL5A2P05997 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL5A2P05997 MIR574-201ENST00000385209 96 ntBASIC24.89■■□□□ 1.58
COL5A2P05997 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC24.89■■□□□ 1.58
COL5A2P05997 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
COL5A2P05997 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
COL5A2P05997 IGHV3-41-201ENST00000613121 348 ntBASIC24.89■■□□□ 1.58
COL5A2P05997 CCNC-219ENST00000627680 896 ntTSL 5 BASIC24.89■■□□□ 1.58
COL5A2P05997 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.89■■□□□ 1.58
COL5A2P05997 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL5A2P05997 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
COL5A2P05997 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.89■■□□□ 1.57
COL5A2P05997 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL5A2P05997 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms