Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.3■□□□□ 0.36
P04436 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.3■□□□□ 0.36
P04436 AC104076.2-201ENST00000448912 469 ntBASIC17.3■□□□□ 0.36
P04436 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 DUX4L26-201ENST00000489078 1255 ntBASIC17.3■□□□□ 0.36
P04436 COX11P1-201ENST00000489116 835 ntBASIC17.3■□□□□ 0.36
P04436 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.3■□□□□ 0.36
P04436 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.3■□□□□ 0.36
P04436 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.3■□□□□ 0.36
P04436 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
P04436 AL031432.5-201ENST00000641059 760 ntBASIC17.3■□□□□ 0.36
P04436 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.3■□□□□ 0.36
P04436 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.3■□□□□ 0.36
P04436 KRT8P45-201ENST00000414328 1447 ntBASIC17.3■□□□□ 0.36
P04436 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.29■□□□□ 0.36
P04436 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
P04436 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
P04436 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.29■□□□□ 0.36
P04436 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.29■□□□□ 0.36
P04436 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
P04436 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 AP000523.1-201ENST00000398242 1049 ntBASIC17.29■□□□□ 0.36
P04436 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.29■□□□□ 0.36
P04436 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.29■□□□□ 0.36
P04436 LINC01238-205ENST00000567549 1107 ntBASIC17.29■□□□□ 0.36
P04436 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.29■□□□□ 0.36
P04436 AC140113.3-201ENST00000605663 199 ntBASIC17.29■□□□□ 0.36
P04436 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.29■□□□□ 0.36
P04436 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
P04436 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
P04436 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
P04436 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 KRT8P3-201ENST00000519669 1449 ntBASIC17.29■□□□□ 0.36
P04436 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.29■□□□□ 0.36
P04436 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04436 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
P04436 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.28■□□□□ 0.36
P04436 AC141586.3-201ENST00000562166 1838 ntBASIC17.28■□□□□ 0.36
P04436 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
P04436 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.28■□□□□ 0.36
P04436 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.28■□□□□ 0.36
P04436 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.28■□□□□ 0.36
P04436 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.28■□□□□ 0.36
P04436 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.28■□□□□ 0.36
P04436 AC006011.2-201ENST00000621313 1158 ntBASIC17.28■□□□□ 0.36
P04436 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
P04436 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.28■□□□□ 0.36
P04436 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.28■□□□□ 0.36
P04436 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.28■□□□□ 0.36
P04436 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
P04436 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04436 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.28■□□□□ 0.36
P04436 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.28■□□□□ 0.36
P04436 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
P04436 FEM1AP3-201ENST00000403722 1741 ntBASIC17.27■□□□□ 0.36
P04436 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P04436 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.27■□□□□ 0.36
P04436 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04436 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.27■□□□□ 0.36
P04436 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04436 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04436 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.27■□□□□ 0.36
P04436 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.27■□□□□ 0.36
P04436 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.27■□□□□ 0.36
P04436 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04436 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.27■□□□□ 0.36
P04436 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.27■□□□□ 0.36
P04436 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.27■□□□□ 0.36
P04436 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms