Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.76■□□□□ 0.91
VTNP04004 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VTNP04004 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.76■□□□□ 0.91
VTNP04004 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VTNP04004 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VTNP04004 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.76■□□□□ 0.91
VTNP04004 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.76■□□□□ 0.91
VTNP04004 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VTNP04004 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.76■□□□□ 0.91
VTNP04004 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.76■□□□□ 0.91
VTNP04004 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VTNP04004 MIR3180-5-201ENST00000583743 153 ntBASIC20.76■□□□□ 0.91
VTNP04004 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.76■□□□□ 0.91
VTNP04004 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.76■□□□□ 0.91
VTNP04004 AC083849.1-201ENST00000615227 514 ntBASIC20.76■□□□□ 0.91
VTNP04004 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VTNP04004 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.76■□□□□ 0.91
VTNP04004 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.76■□□□□ 0.91
VTNP04004 AC007952.6-201ENST00000573168 2673 ntBASIC20.76■□□□□ 0.91
VTNP04004 AC003957.1-201ENST00000625108 2673 ntBASIC20.76■□□□□ 0.91
VTNP04004 IRX1P1-201ENST00000438849 1838 ntBASIC20.76■□□□□ 0.91
VTNP04004 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VTNP04004 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VTNP04004 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VTNP04004 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTNP04004 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VTNP04004 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTNP04004 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.75■□□□□ 0.91
VTNP04004 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VTNP04004 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTNP04004 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTNP04004 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTNP04004 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.75■□□□□ 0.91
VTNP04004 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTNP04004 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.75■□□□□ 0.91
VTNP04004 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
VTNP04004 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.75■□□□□ 0.91
VTNP04004 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.75■□□□□ 0.91
VTNP04004 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.75■□□□□ 0.91
VTNP04004 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.75■□□□□ 0.91
VTNP04004 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
VTNP04004 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VTNP04004 HYMAI.1-201ENST00000620949 238 ntBASIC20.75■□□□□ 0.91
VTNP04004 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
VTNP04004 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.75■□□□□ 0.91
VTNP04004 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTNP04004 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
VTNP04004 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.75■□□□□ 0.91
VTNP04004 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.75■□□□□ 0.91
VTNP04004 AC005332.1-201ENST00000577698 1310 ntBASIC20.75■□□□□ 0.91
VTNP04004 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.74■□□□□ 0.91
VTNP04004 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VTNP04004 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.74■□□□□ 0.91
VTNP04004 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.74■□□□□ 0.91
VTNP04004 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.74■□□□□ 0.91
VTNP04004 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
VTNP04004 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.74■□□□□ 0.91
VTNP04004 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VTNP04004 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTNP04004 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.74■□□□□ 0.91
VTNP04004 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 IER3-202ENST00000376377 1350 ntBASIC20.73■□□□□ 0.91
VTNP04004 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 FEM1AP3-201ENST00000403722 1741 ntBASIC20.73■□□□□ 0.91
VTNP04004 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.73■□□□□ 0.91
VTNP04004 LINC01311-201ENST00000565162 1445 ntBASIC20.73■□□□□ 0.91
VTNP04004 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.73■□□□□ 0.91
VTNP04004 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.73■□□□□ 0.91
VTNP04004 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.73■□□□□ 0.91
VTNP04004 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 AL512353.2-201ENST00000448759 1962 ntBASIC20.73■□□□□ 0.91
VTNP04004 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.73■□□□□ 0.91
VTNP04004 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VTNP04004 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTNP04004 RCC2P3-201ENST00000418112 1537 ntBASIC20.73■□□□□ 0.91
VTNP04004 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.73■□□□□ 0.91
VTNP04004 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.73■□□□□ 0.91
VTNP04004 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VTNP04004 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.72■□□□□ 0.91
VTNP04004 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
VTNP04004 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.72■□□□□ 0.91
VTNP04004 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms