Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.25■□□□□ 0.99
GGPS1O95749 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.25■□□□□ 0.99
GGPS1O95749 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.25■□□□□ 0.99
GGPS1O95749 STARP1-201ENST00000397973 869 ntBASIC21.25■□□□□ 0.99
GGPS1O95749 AC112907.2-201ENST00000448639 330 ntBASIC21.25■□□□□ 0.99
GGPS1O95749 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 KRT8P3-201ENST00000519669 1449 ntBASIC21.25■□□□□ 0.99
GGPS1O95749 AC036111.1-201ENST00000533973 1582 ntBASIC21.25■□□□□ 0.99
GGPS1O95749 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
GGPS1O95749 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.25■□□□□ 0.99
GGPS1O95749 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.25■□□□□ 0.99
GGPS1O95749 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.25■□□□□ 0.99
GGPS1O95749 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GGPS1O95749 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GGPS1O95749 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GGPS1O95749 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GGPS1O95749 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
GGPS1O95749 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.24■□□□□ 0.99
GGPS1O95749 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GGPS1O95749 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GGPS1O95749 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.24■□□□□ 0.99
GGPS1O95749 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GGPS1O95749 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GGPS1O95749 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GGPS1O95749 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.24■□□□□ 0.99
GGPS1O95749 SPDYE15P-201ENST00000424157 909 ntBASIC21.24■□□□□ 0.99
GGPS1O95749 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
GGPS1O95749 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.24■□□□□ 0.99
GGPS1O95749 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
GGPS1O95749 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.24■□□□□ 0.99
GGPS1O95749 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
GGPS1O95749 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.24■□□□□ 0.99
GGPS1O95749 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GGPS1O95749 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.24■□□□□ 0.99
GGPS1O95749 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.24■□□□□ 0.99
GGPS1O95749 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
GGPS1O95749 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
GGPS1O95749 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
GGPS1O95749 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
GGPS1O95749 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.23■□□□□ 0.99
GGPS1O95749 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.23■□□□□ 0.99
GGPS1O95749 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.23■□□□□ 0.99
GGPS1O95749 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.23■□□□□ 0.99
GGPS1O95749 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.23■□□□□ 0.99
GGPS1O95749 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.23■□□□□ 0.99
GGPS1O95749 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GGPS1O95749 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.23■□□□□ 0.99
GGPS1O95749 IER3-202ENST00000376377 1350 ntBASIC21.23■□□□□ 0.99
GGPS1O95749 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
GGPS1O95749 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
GGPS1O95749 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.22■□□□□ 0.99
GGPS1O95749 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.22■□□□□ 0.99
GGPS1O95749 MCCD1P1-208ENST00000445732 328 ntBASIC21.22■□□□□ 0.99
GGPS1O95749 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.22■□□□□ 0.99
GGPS1O95749 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
GGPS1O95749 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.22■□□□□ 0.99
GGPS1O95749 AC083849.1-201ENST00000615227 514 ntBASIC21.22■□□□□ 0.99
GGPS1O95749 HYMAI.1-201ENST00000620949 238 ntBASIC21.22■□□□□ 0.99
GGPS1O95749 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.22■□□□□ 0.99
GGPS1O95749 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
GGPS1O95749 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.22■□□□□ 0.99
GGPS1O95749 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
GGPS1O95749 AC005332.1-201ENST00000577698 1310 ntBASIC21.22■□□□□ 0.99
GGPS1O95749 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
GGPS1O95749 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GGPS1O95749 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.22■□□□□ 0.99
GGPS1O95749 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
GGPS1O95749 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.21■□□□□ 0.99
GGPS1O95749 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.21■□□□□ 0.99
GGPS1O95749 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms