Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC29.54■■■□□ 2.32
PCF11O94913 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC29.54■■■□□ 2.32
PCF11O94913 BCL10-202ENST00000620248 774 ntTSL 5 BASIC29.54■■■□□ 2.32
PCF11O94913 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PCF11O94913 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
PCF11O94913 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
PCF11O94913 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
PCF11O94913 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCF11O94913 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
PCF11O94913 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCF11O94913 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
PCF11O94913 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC29.53■■■□□ 2.32
PCF11O94913 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC29.53■■■□□ 2.32
PCF11O94913 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCF11O94913 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC29.53■■■□□ 2.32
PCF11O94913 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCF11O94913 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC29.53■■■□□ 2.32
PCF11O94913 AC141586.3-201ENST00000562166 1838 ntBASIC29.53■■■□□ 2.32
PCF11O94913 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCF11O94913 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCF11O94913 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCF11O94913 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
PCF11O94913 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC29.52■■■□□ 2.32
PCF11O94913 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC29.52■■■□□ 2.32
PCF11O94913 MIR3180-1-201ENST00000580374 94 ntBASIC29.52■■■□□ 2.32
PCF11O94913 MIR3180-3-201ENST00000584616 94 ntBASIC29.52■■■□□ 2.32
PCF11O94913 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCF11O94913 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCF11O94913 UBQLN4P1-201ENST00000461599 1801 ntBASIC29.52■■■□□ 2.32
PCF11O94913 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
PCF11O94913 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCF11O94913 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC29.52■■■□□ 2.32
PCF11O94913 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCF11O94913 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
PCF11O94913 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC29.52■■■□□ 2.32
PCF11O94913 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCF11O94913 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC29.52■■■□□ 2.32
PCF11O94913 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
PCF11O94913 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC29.52■■■□□ 2.32
PCF11O94913 AC112497.1-201ENST00000624824 639 ntBASIC29.52■■■□□ 2.32
PCF11O94913 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
PCF11O94913 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
PCF11O94913 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
PCF11O94913 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC29.51■■■□□ 2.31
PCF11O94913 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 AL162741.1-201ENST00000565563 1558 ntBASIC29.51■■■□□ 2.31
PCF11O94913 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
PCF11O94913 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC29.51■■■□□ 2.31
PCF11O94913 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC29.51■■■□□ 2.31
PCF11O94913 RN7SL510P-201ENST00000581311 263 ntBASIC29.51■■■□□ 2.31
PCF11O94913 TK1-205ENST00000590862 642 ntTSL 3 BASIC29.51■■■□□ 2.31
PCF11O94913 AC010240.3-201ENST00000607688 395 ntBASIC29.51■■■□□ 2.31
PCF11O94913 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
PCF11O94913 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCF11O94913 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCF11O94913 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC29.5■■■□□ 2.31
PCF11O94913 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCF11O94913 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC29.5■■■□□ 2.31
PCF11O94913 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
PCF11O94913 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PCF11O94913 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC29.5■■■□□ 2.31
PCF11O94913 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC29.5■■■□□ 2.31
PCF11O94913 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCF11O94913 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC29.5■■■□□ 2.31
PCF11O94913 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC29.49■■■□□ 2.31
PCF11O94913 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
PCF11O94913 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC29.49■■■□□ 2.31
PCF11O94913 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
PCF11O94913 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC29.49■■■□□ 2.31
PCF11O94913 AC092119.3-201ENST00000612618 583 ntBASIC29.49■■■□□ 2.31
PCF11O94913 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
PCF11O94913 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC29.49■■■□□ 2.31
PCF11O94913 BID-204ENST00000399767 2129 ntTSL 2 BASIC29.49■■■□□ 2.31
PCF11O94913 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCF11O94913 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCF11O94913 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
PCF11O94913 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC29.48■■■□□ 2.31
PCF11O94913 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC29.48■■■□□ 2.31
PCF11O94913 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
PCF11O94913 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms