Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.29■■□□□ 1.48
PTCD1O75127 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.29■■□□□ 1.48
PTCD1O75127 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.29■■□□□ 1.48
PTCD1O75127 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.29■■□□□ 1.48
PTCD1O75127 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCD1O75127 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCD1O75127 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PTCD1O75127 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.28■■□□□ 1.48
PTCD1O75127 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 HLA-F-220ENST00000434407 884 ntBASIC24.28■■□□□ 1.48
PTCD1O75127 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 WDR6-223ENST00000627177 207 ntTSL 2 BASIC24.28■■□□□ 1.48
PTCD1O75127 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.28■■□□□ 1.48
PTCD1O75127 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.28■■□□□ 1.48
PTCD1O75127 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.28■■□□□ 1.48
PTCD1O75127 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.28■■□□□ 1.48
PTCD1O75127 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
PTCD1O75127 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD1O75127 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PTCD1O75127 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.27■■□□□ 1.48
PTCD1O75127 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 AL391807.1-203ENST00000604392 2365 ntBASIC24.27■■□□□ 1.48
PTCD1O75127 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PTCD1O75127 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PTCD1O75127 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PTCD1O75127 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.27■■□□□ 1.48
PTCD1O75127 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.27■■□□□ 1.48
PTCD1O75127 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.27■■□□□ 1.48
PTCD1O75127 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PTCD1O75127 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.27■■□□□ 1.48
PTCD1O75127 AL136038.4-201ENST00000603606 1261 ntBASIC24.27■■□□□ 1.48
PTCD1O75127 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.27■■□□□ 1.48
PTCD1O75127 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.27■■□□□ 1.48
PTCD1O75127 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.27■■□□□ 1.48
PTCD1O75127 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.27■■□□□ 1.48
PTCD1O75127 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.27■■□□□ 1.48
PTCD1O75127 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.27■■□□□ 1.48
PTCD1O75127 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD1O75127 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
PTCD1O75127 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.26■■□□□ 1.47
PTCD1O75127 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PTCD1O75127 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.26■■□□□ 1.47
PTCD1O75127 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.26■■□□□ 1.47
PTCD1O75127 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.26■■□□□ 1.47
PTCD1O75127 KRT8P26-201ENST00000534154 1276 ntBASIC24.26■■□□□ 1.47
PTCD1O75127 MIR3917-201ENST00000580971 93 ntBASIC24.26■■□□□ 1.47
PTCD1O75127 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.26■■□□□ 1.47
PTCD1O75127 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
PTCD1O75127 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.26■■□□□ 1.47
PTCD1O75127 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.26■■□□□ 1.47
PTCD1O75127 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
PTCD1O75127 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD1O75127 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
PTCD1O75127 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.26■■□□□ 1.47
PTCD1O75127 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.25■■□□□ 1.47
PTCD1O75127 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PTCD1O75127 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.25■■□□□ 1.47
PTCD1O75127 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC24.25■■□□□ 1.47
PTCD1O75127 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.25■■□□□ 1.47
PTCD1O75127 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms