Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CTNND1O60716 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.11■■□□□ 1.13
CTNND1O60716 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CTNND1O60716 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CTNND1O60716 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CTNND1O60716 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CTNND1O60716 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CTNND1O60716 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CTNND1O60716 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.11■■□□□ 1.13
CTNND1O60716 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.11■■□□□ 1.13
CTNND1O60716 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC22.11■■□□□ 1.13
CTNND1O60716 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
CTNND1O60716 MIR3180-1-201ENST00000580374 94 ntBASIC22.11■■□□□ 1.13
CTNND1O60716 MIR3180-3-201ENST00000584616 94 ntBASIC22.11■■□□□ 1.13
CTNND1O60716 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.11■■□□□ 1.13
CTNND1O60716 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CTNND1O60716 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.11■■□□□ 1.13
CTNND1O60716 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CTNND1O60716 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CTNND1O60716 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CTNND1O60716 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CTNND1O60716 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CTNND1O60716 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.1■■□□□ 1.13
CTNND1O60716 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.1■■□□□ 1.13
CTNND1O60716 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CTNND1O60716 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CTNND1O60716 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.1■■□□□ 1.13
CTNND1O60716 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.1■■□□□ 1.13
CTNND1O60716 AL162741.1-201ENST00000565563 1558 ntBASIC22.1■■□□□ 1.13
CTNND1O60716 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.1■■□□□ 1.13
CTNND1O60716 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.1■■□□□ 1.13
CTNND1O60716 MIR3917-201ENST00000580971 93 ntBASIC22.1■■□□□ 1.13
CTNND1O60716 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CTNND1O60716 IRF5-214ENST00000613821 595 ntTSL 5 BASIC22.1■■□□□ 1.13
CTNND1O60716 AL157888.1-201ENST00000631930 593 ntBASIC22.1■■□□□ 1.13
CTNND1O60716 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.1■■□□□ 1.13
CTNND1O60716 AC112907.3-201ENST00000577781 2400 ntBASIC22.1■■□□□ 1.13
CTNND1O60716 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.1■■□□□ 1.13
CTNND1O60716 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CTNND1O60716 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CTNND1O60716 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.09■■□□□ 1.13
CTNND1O60716 AP002383.4-201ENST00000442518 975 ntBASIC22.09■■□□□ 1.13
CTNND1O60716 SKP2-204ENST00000508514 821 ntTSL 3 BASIC22.09■■□□□ 1.13
CTNND1O60716 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.09■■□□□ 1.13
CTNND1O60716 SDHD-206ENST00000528182 754 ntTSL 3 BASIC22.09■■□□□ 1.13
CTNND1O60716 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
CTNND1O60716 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.09■■□□□ 1.13
CTNND1O60716 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.09■■□□□ 1.13
CTNND1O60716 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.09■■□□□ 1.13
CTNND1O60716 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CTNND1O60716 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.09■■□□□ 1.13
CTNND1O60716 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.09■■□□□ 1.13
CTNND1O60716 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.09■■□□□ 1.13
CTNND1O60716 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CTNND1O60716 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CTNND1O60716 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CTNND1O60716 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
CTNND1O60716 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.08■■□□□ 1.13
CTNND1O60716 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CTNND1O60716 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CTNND1O60716 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CTNND1O60716 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CTNND1O60716 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CTNND1O60716 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.08■■□□□ 1.13
CTNND1O60716 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
CTNND1O60716 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.08■■□□□ 1.13
CTNND1O60716 KRT8P26-201ENST00000534154 1276 ntBASIC22.08■■□□□ 1.13
CTNND1O60716 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.08■■□□□ 1.13
CTNND1O60716 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.08■■□□□ 1.13
CTNND1O60716 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.08■■□□□ 1.13
CTNND1O60716 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.08■■□□□ 1.13
CTNND1O60716 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CTNND1O60716 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CTNND1O60716 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
CTNND1O60716 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
CTNND1O60716 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CTNND1O60716 AL109659.2-201ENST00000606809 1674 ntBASIC22.07■■□□□ 1.12
CTNND1O60716 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.07■■□□□ 1.12
CTNND1O60716 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CTNND1O60716 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.07■■□□□ 1.12
CTNND1O60716 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CTNND1O60716 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CTNND1O60716 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CTNND1O60716 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.07■■□□□ 1.12
CTNND1O60716 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms