Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.39■□□□□ 0.53
GFRA3O60609 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GFRA3O60609 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.39■□□□□ 0.53
GFRA3O60609 MCCD1P1-208ENST00000445732 328 ntBASIC18.39■□□□□ 0.53
GFRA3O60609 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.39■□□□□ 0.53
GFRA3O60609 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.39■□□□□ 0.53
GFRA3O60609 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
GFRA3O60609 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.39■□□□□ 0.53
GFRA3O60609 AL035252.4-201ENST00000624174 288 ntBASIC18.39■□□□□ 0.53
GFRA3O60609 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GFRA3O60609 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GFRA3O60609 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.39■□□□□ 0.53
GFRA3O60609 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
GFRA3O60609 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.38■□□□□ 0.53
GFRA3O60609 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GFRA3O60609 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 GK-202ENST00000378941 458 ntTSL 3 BASIC18.38■□□□□ 0.53
GFRA3O60609 AC007967.2-201ENST00000432613 625 ntBASIC18.38■□□□□ 0.53
GFRA3O60609 BCRP1-201ENST00000444246 691 ntBASIC18.38■□□□□ 0.53
GFRA3O60609 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.38■□□□□ 0.53
GFRA3O60609 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.38■□□□□ 0.53
GFRA3O60609 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.38■□□□□ 0.53
GFRA3O60609 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.38■□□□□ 0.53
GFRA3O60609 AL096865.1-201ENST00000606796 927 ntBASIC18.38■□□□□ 0.53
GFRA3O60609 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GFRA3O60609 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.38■□□□□ 0.53
GFRA3O60609 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GFRA3O60609 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GFRA3O60609 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.38■□□□□ 0.53
GFRA3O60609 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFRA3O60609 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFRA3O60609 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFRA3O60609 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
GFRA3O60609 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFRA3O60609 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFRA3O60609 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFRA3O60609 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.37■□□□□ 0.53
GFRA3O60609 AC254562.1-201ENST00000417586 456 ntBASIC18.37■□□□□ 0.53
GFRA3O60609 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFRA3O60609 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.37■□□□□ 0.53
GFRA3O60609 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.37■□□□□ 0.53
GFRA3O60609 AC005829.1-201ENST00000570002 483 ntBASIC18.37■□□□□ 0.53
GFRA3O60609 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFRA3O60609 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.37■□□□□ 0.53
GFRA3O60609 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFRA3O60609 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFRA3O60609 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.37■□□□□ 0.53
GFRA3O60609 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
GFRA3O60609 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.37■□□□□ 0.53
GFRA3O60609 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
GFRA3O60609 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GFRA3O60609 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.37■□□□□ 0.53
GFRA3O60609 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GFRA3O60609 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFRA3O60609 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFRA3O60609 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFRA3O60609 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFRA3O60609 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.36■□□□□ 0.53
GFRA3O60609 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFRA3O60609 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
GFRA3O60609 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GFRA3O60609 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.36■□□□□ 0.53
GFRA3O60609 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.36■□□□□ 0.53
GFRA3O60609 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.36■□□□□ 0.53
GFRA3O60609 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GFRA3O60609 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.36■□□□□ 0.53
GFRA3O60609 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.36■□□□□ 0.53
GFRA3O60609 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GFRA3O60609 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.36■□□□□ 0.53
GFRA3O60609 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GFRA3O60609 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.36■□□□□ 0.53
GFRA3O60609 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.36■□□□□ 0.53
GFRA3O60609 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.36■□□□□ 0.53
GFRA3O60609 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.36■□□□□ 0.53
GFRA3O60609 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFRA3O60609 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.36■□□□□ 0.53
GFRA3O60609 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFRA3O60609 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.36■□□□□ 0.53
GFRA3O60609 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
GFRA3O60609 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.35■□□□□ 0.53
GFRA3O60609 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
GFRA3O60609 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.35■□□□□ 0.53
GFRA3O60609 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GFRA3O60609 RPS2P1-201ENST00000434010 821 ntBASIC18.35■□□□□ 0.53
GFRA3O60609 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms