Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.66■□□□□ 0.74
MSI1O43347 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.66■□□□□ 0.74
MSI1O43347 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 KRT8P45-201ENST00000414328 1447 ntBASIC19.66■□□□□ 0.74
MSI1O43347 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MSI1O43347 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MSI1O43347 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
MSI1O43347 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
MSI1O43347 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.65■□□□□ 0.74
MSI1O43347 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.65■□□□□ 0.74
MSI1O43347 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.65■□□□□ 0.74
MSI1O43347 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.65■□□□□ 0.74
MSI1O43347 ATP5G1P1-201ENST00000448724 379 ntBASIC19.65■□□□□ 0.74
MSI1O43347 AC092865.7-201ENST00000641832 219 ntBASIC19.65■□□□□ 0.74
MSI1O43347 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.65■□□□□ 0.74
MSI1O43347 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 KRT8P3-201ENST00000519669 1449 ntBASIC19.65■□□□□ 0.74
MSI1O43347 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MSI1O43347 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSI1O43347 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.65■□□□□ 0.74
MSI1O43347 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
MSI1O43347 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MSI1O43347 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
MSI1O43347 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MSI1O43347 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSI1O43347 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSI1O43347 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
MSI1O43347 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSI1O43347 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.64■□□□□ 0.73
MSI1O43347 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.64■□□□□ 0.73
MSI1O43347 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.64■□□□□ 0.73
MSI1O43347 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.64■□□□□ 0.73
MSI1O43347 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.64■□□□□ 0.73
MSI1O43347 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.64■□□□□ 0.73
MSI1O43347 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSI1O43347 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MSI1O43347 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSI1O43347 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSI1O43347 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSI1O43347 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.63■□□□□ 0.73
MSI1O43347 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.63■□□□□ 0.73
MSI1O43347 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.63■□□□□ 0.73
MSI1O43347 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.63■□□□□ 0.73
MSI1O43347 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.63■□□□□ 0.73
MSI1O43347 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.63■□□□□ 0.73
MSI1O43347 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MSI1O43347 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.63■□□□□ 0.73
MSI1O43347 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSI1O43347 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
MSI1O43347 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSI1O43347 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
MSI1O43347 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MSI1O43347 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.62■□□□□ 0.73
MSI1O43347 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MSI1O43347 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSI1O43347 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MSI1O43347 AL023284.2-201ENST00000405850 579 ntBASIC19.62■□□□□ 0.73
MSI1O43347 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.62■□□□□ 0.73
MSI1O43347 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.62■□□□□ 0.73
MSI1O43347 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MSI1O43347 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.62■□□□□ 0.73
MSI1O43347 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.62■□□□□ 0.73
MSI1O43347 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.62■□□□□ 0.73
MSI1O43347 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.62■□□□□ 0.73
MSI1O43347 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.62■□□□□ 0.73
MSI1O43347 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.62■□□□□ 0.73
MSI1O43347 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSI1O43347 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.62■□□□□ 0.73
MSI1O43347 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MSI1O43347 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
MSI1O43347 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms