Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
FOXN1O15353 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.62■■□□□ 1.21
FOXN1O15353 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
FOXN1O15353 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
FOXN1O15353 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN1O15353 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
FOXN1O15353 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN1O15353 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN1O15353 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
FOXN1O15353 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN1O15353 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.61■■□□□ 1.21
FOXN1O15353 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.61■■□□□ 1.21
FOXN1O15353 SLC25A1P1-201ENST00000528351 927 ntBASIC22.61■■□□□ 1.21
FOXN1O15353 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
FOXN1O15353 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.61■■□□□ 1.21
FOXN1O15353 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.61■■□□□ 1.21
FOXN1O15353 AC027796.2-201ENST00000575326 344 ntBASIC22.61■■□□□ 1.21
FOXN1O15353 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.61■■□□□ 1.21
FOXN1O15353 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.61■■□□□ 1.21
FOXN1O15353 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN1O15353 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.61■■□□□ 1.21
FOXN1O15353 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FOXN1O15353 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN1O15353 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.6■■□□□ 1.21
FOXN1O15353 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN1O15353 IL9RP2-201ENST00000423948 1312 ntBASIC22.6■■□□□ 1.21
FOXN1O15353 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN1O15353 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.6■■□□□ 1.21
FOXN1O15353 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN1O15353 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.6■■□□□ 1.21
FOXN1O15353 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.6■■□□□ 1.21
FOXN1O15353 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN1O15353 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
FOXN1O15353 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN1O15353 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.6■■□□□ 1.21
FOXN1O15353 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
FOXN1O15353 KRT18P31-201ENST00000506277 1292 ntBASIC22.6■■□□□ 1.21
FOXN1O15353 KRT18P58-201ENST00000527480 1120 ntBASIC22.6■■□□□ 1.21
FOXN1O15353 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN1O15353 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.6■■□□□ 1.21
FOXN1O15353 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
FOXN1O15353 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN1O15353 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
FOXN1O15353 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FOXN1O15353 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.59■■□□□ 1.21
FOXN1O15353 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.59■■□□□ 1.21
FOXN1O15353 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.59■■□□□ 1.21
FOXN1O15353 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
FOXN1O15353 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXN1O15353 PMS2P2-201ENST00000425039 1128 ntBASIC22.59■■□□□ 1.21
FOXN1O15353 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.59■■□□□ 1.21
FOXN1O15353 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
FOXN1O15353 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.59■■□□□ 1.21
FOXN1O15353 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.59■■□□□ 1.21
FOXN1O15353 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.59■■□□□ 1.21
FOXN1O15353 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
FOXN1O15353 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.59■■□□□ 1.21
FOXN1O15353 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.59■■□□□ 1.21
FOXN1O15353 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXN1O15353 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXN1O15353 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.59■■□□□ 1.21
FOXN1O15353 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.58■■□□□ 1.21
FOXN1O15353 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.58■■□□□ 1.21
FOXN1O15353 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
FOXN1O15353 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.58■■□□□ 1.21
FOXN1O15353 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.58■■□□□ 1.21
FOXN1O15353 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.58■■□□□ 1.21
FOXN1O15353 MIR564-202ENST00000385049 94 ntBASIC22.58■■□□□ 1.21
FOXN1O15353 BX842568.4-201ENST00000421222 227 ntBASIC22.58■■□□□ 1.21
FOXN1O15353 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.58■■□□□ 1.21
FOXN1O15353 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.58■■□□□ 1.21
FOXN1O15353 FOSL1P1-201ENST00000511041 816 ntBASIC22.58■■□□□ 1.21
FOXN1O15353 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
FOXN1O15353 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
FOXN1O15353 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
FOXN1O15353 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
FOXN1O15353 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.57■■□□□ 1.2
FOXN1O15353 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.57■■□□□ 1.2
FOXN1O15353 AC005104.2-201ENST00000427818 678 ntBASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms