Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN4O14493 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN4O14493 TSPY17P-201ENST00000450329 467 ntBASIC17.84■□□□□ 0.45
CLDN4O14493 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN4O14493 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN4O14493 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN4O14493 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN4O14493 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN4O14493 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN4O14493 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN4O14493 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN4O14493 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN4O14493 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN4O14493 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN4O14493 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.83■□□□□ 0.45
CLDN4O14493 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN4O14493 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.83■□□□□ 0.45
CLDN4O14493 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CLDN4O14493 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN4O14493 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN4O14493 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CLDN4O14493 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN4O14493 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN4O14493 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN4O14493 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.83■□□□□ 0.45
CLDN4O14493 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.83■□□□□ 0.45
CLDN4O14493 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN4O14493 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN4O14493 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN4O14493 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CLDN4O14493 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN4O14493 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 LINC01568-207ENST00000641790 1380 ntBASIC17.82■□□□□ 0.44
CLDN4O14493 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN4O14493 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLDN4O14493 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN4O14493 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLDN4O14493 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN4O14493 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN4O14493 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN4O14493 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN4O14493 AC133561.5-201ENST00000635547 218 ntBASIC17.82■□□□□ 0.44
CLDN4O14493 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN4O14493 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN4O14493 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN4O14493 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN4O14493 CYP2D8P-201ENST00000433633 1490 ntBASIC17.82■□□□□ 0.44
CLDN4O14493 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 KRT8P3-201ENST00000519669 1449 ntBASIC17.81■□□□□ 0.44
CLDN4O14493 KRT8P9-201ENST00000558927 1449 ntBASIC17.81■□□□□ 0.44
CLDN4O14493 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN4O14493 KRT18P22-201ENST00000402024 1347 ntBASIC17.81■□□□□ 0.44
CLDN4O14493 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN4O14493 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN4O14493 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN4O14493 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN4O14493 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN4O14493 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN4O14493 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.81■□□□□ 0.44
CLDN4O14493 AC010947.1-201ENST00000623454 693 ntBASIC17.81■□□□□ 0.44
CLDN4O14493 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN4O14493 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN4O14493 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN4O14493 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN4O14493 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.81■□□□□ 0.44
CLDN4O14493 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms