Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN5O00501 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLDN5O00501 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.97■□□□□ 0.79
CLDN5O00501 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN5O00501 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLDN5O00501 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.97■□□□□ 0.79
CLDN5O00501 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN5O00501 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CLDN5O00501 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN5O00501 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
CLDN5O00501 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN5O00501 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN5O00501 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.96■□□□□ 0.79
CLDN5O00501 AC141257.4-201ENST00000634557 245 ntBASIC19.96■□□□□ 0.79
CLDN5O00501 AC136944.6-201ENST00000634818 245 ntBASIC19.96■□□□□ 0.79
CLDN5O00501 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CLDN5O00501 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CLDN5O00501 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CLDN5O00501 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLDN5O00501 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN5O00501 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN5O00501 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN5O00501 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLDN5O00501 AL512353.2-201ENST00000448759 1962 ntBASIC19.95■□□□□ 0.78
CLDN5O00501 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN5O00501 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
CLDN5O00501 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
CLDN5O00501 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.95■□□□□ 0.78
CLDN5O00501 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN5O00501 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN5O00501 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 AC010331.1-201ENST00000611423 582 ntBASIC19.95■□□□□ 0.78
CLDN5O00501 CR769767.2-201ENST00000622735 460 ntBASIC19.95■□□□□ 0.78
CLDN5O00501 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN5O00501 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN5O00501 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN5O00501 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.94■□□□□ 0.78
CLDN5O00501 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 AC117947.1-201ENST00000427448 529 ntBASIC19.94■□□□□ 0.78
CLDN5O00501 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLDN5O00501 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN5O00501 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.94■□□□□ 0.78
CLDN5O00501 AC139887.4-201ENST00000607877 719 ntBASIC19.94■□□□□ 0.78
CLDN5O00501 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLDN5O00501 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN5O00501 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.94■□□□□ 0.78
CLDN5O00501 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CLDN5O00501 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN5O00501 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN5O00501 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN5O00501 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN5O00501 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN5O00501 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN5O00501 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN5O00501 RCC2P3-201ENST00000418112 1537 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms