Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 DUSP5P2-201ENST00000426873 1033 ntBASIC17.52■□□□□ 0.4
TNFRSF11BO00300 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF11BO00300 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF11BO00300 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 AL050303.2-201ENST00000619798 666 ntBASIC17.51■□□□□ 0.39
TNFRSF11BO00300 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF11BO00300 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 AC026271.2-201ENST00000428091 497 ntBASIC17.5■□□□□ 0.39
TNFRSF11BO00300 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF11BO00300 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 AC073592.3-201ENST00000625118 1834 ntBASIC17.49■□□□□ 0.39
TNFRSF11BO00300 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF11BO00300 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms